RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 HILPDAQ9Y5L2 63 aa12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 NDUFB4O95168 129 aa12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 SDHCQ99643 169 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 TNFRSF6BO95407 300 aa12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 IGHV4-39P01824 125 aa12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 SPINK8P0C7L1 97 aa12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 PEBP1P30086 187 aaKnown RBP12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 CD300LDQ6UXZ3 194 aa12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 FAM219AQ8IW50 185 aa12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 ZNF764Q96H86 408 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 TTTY12Q9BZ98 90 aa12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 TLNRD1Q9H1K6 362 aa12.21□□□□□ -0.45
RAPGEF1-202ENST00000372190 ZFP36L2P47974 494 aaKnown RBP12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 RPS20P60866 119 aaKnown RBP12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 WDR38Q5JTN6 314 aa12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 SPANXCQ9NY87 97 aa12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 ZNF391Q9UJN7 358 aa12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 KLF4O43474 513 aa12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 FGF5P12034 268 aa12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 SPINK2P20155 84 aa12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 P2RY4P51582 365 aa12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 RAC3P60763 192 aa12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 TM4SF20Q53R12 229 aa12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 OR1L8Q8NGR8 309 aa12.21□□□□□ -0.46
RAPGEF1-202ENST00000372190 A0A1W2PPV9 198 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 KLK2P20151 261 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 HOXA5P20719 270 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 HIST1H4AP62805 103 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 MEF2BQ02080 365 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 KIAA0040Q15053 153 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 OCIAD2Q56VL3 154 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 V9GYH0 126 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 FHL5Q5TD97 284 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 TEPPQ6URK8 271 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 PPIAL4DF5H284 164 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 J3KRW8 73 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 HMGA2P52926 109 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 ST6GALNAC6Q969X2 333 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 ATG2BQ96BY7 2078 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 TUBGCP6Q96RT7 1819 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 TRAV5A0A0B4J249 113 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 NGFP01138 241 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 VSTM2AQ8TAG5 236 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 ABHD1Q96SE0 405 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 IGHV1-45A0A0A0MS14 117 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 TRBV7-9A0A0J9YWB2 115 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 GREM1O60565 184 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 PAXXQ9BUH6 204 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 PRDM13Q9H4Q3 707 aa12.2□□□□□ -0.46
RAPGEF1-202ENST00000372190 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 OR4A8P0C604 315 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 CXCL2P19875 107 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 DLX6P56179 175 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 SEC11AP67812 179 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 PMVKQ15126 192 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 TGIF1Q15583 401 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 TMEM155Q4W5P6 130 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 KCNS1Q96KK3 526 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 PGLYRP4Q96LB8 373 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 SLC52A3Q9NQ40 469 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 CISD1Q9NZ45 108 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 A0A1W2PQD3 144 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 SNAI2O43623 268 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 C10orf128Q5T292 105 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 ORAOV1Q8WV07 137 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 TMEM171Q8WVE6 324 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 MYO16Q9Y6X6 1858 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 TRAV8-1A0A0A6YYK1 113 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 S100A7L2Q5SY68 101 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 PPIAL4EA0A075B759 164 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 TRDCB7Z8K6 153 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 C16orf97H3BN30 126 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 RRHO14718 337 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 CFDP00746 253 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 PPIAL4FP0DN26 164 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 LYG1Q8N1E2 194 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 FAM181AQ8N9Y4 354 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 OR5AN1Q8NGI8 311 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 PLAC1Q9HBJ0 212 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 NHP2Q9NX24 153 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 PPIAL4AQ9Y536 164 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 NDUFC2O95298 119 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 PHLDA1Q8WV24 401 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 RASL11BQ9BPW5 248 aa12.19□□□□□ -0.46
RAPGEF1-202ENST00000372190 A0A1B0GU03 582 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 HOXA3O43365 443 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 ISG15P05161 165 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 VKORC1L1Q8N0U8 176 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 PLSCR2Q9NRY7 297 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 PRR19A6NJB7 356 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 H0YL77 283 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 ZNF883P0CG24 379 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 ZNF32P17041 273 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 ATXN8Q156A1 80 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 ACSF3Q4G176 576 aaPredicted RBP12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 ZNF774Q6NX45 483 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 TMEM250H0YL14 139 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 TSPAN2O60636 221 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 TRPM6Q9BX84 2022 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms