RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 SMIM17P0DL12 118 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 GNB3P16520 340 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 SRP14P37108 136 aaKnown RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 MMDQ15546 238 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 MSMPQ1L6U9 139 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 NRN1LQ496H8 165 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 WIPI1Q5MNZ9 446 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 PHYHD1Q5SRE7 291 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 DNM1P34Q6PK57 102 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 Q6ZWC4 215 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 ABHD12BQ7Z5M8 362 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF584Q8IVC4 421 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 UEVLDQ8IX04 471 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 C1orf174Q8IYL3 243 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 OR51D1Q8NGF3 324 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 ERGIC1Q969X5 290 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 OR10C1Q96KK4 312 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 HS3ST6Q96QI5 342 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 B4GALT7Q9UBV7 327 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 MRM2Q9UI43 246 aaKnown RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 DNAJC13O75165 2243 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 ZGRF1Q86YA3 2104 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 SPTA1P02549 2419 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 IGHV3-15A0A0B4J1V0 119 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 C5orf51A6NDU8 294 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 AQP7P3A6NL99 342 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 FAM166BA8MTA8 275 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 H0Y8G0 127 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 GPR137BO60478 399 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 UPK3AO75631 287 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 AKR1C4P17516 323 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 CNN1P51911 297 aaKnown RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 NANOS3P60323 173 aaKnown RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 SGCBQ16585 318 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 KCTD18Q6PI47 426 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 H1FNTQ75WM6 255 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 GMPPAQ96IJ6 420 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 VAMP8Q9BV40 100 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 SSBP4Q9BWG4 385 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 OR2S2Q9NQN1 319 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 BOKQ9UMX3 212 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 C14orf166Q9Y224 244 aaKnown RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 WSB1Q9Y6I7 421 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 PRSS37A4D1T9 235 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 MAP1LC3B2A6NCE7 125 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 M0QYG6 137 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 TRAF3IP2O43734 574 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-204ENST00000369530 HYPMO75409 117 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 MT-ATP6P00846 226 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 SRYQ05066 204 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF260Q3ZCT1 412 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 SLC18B1Q6NT16 456 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 NEGR1Q7Z3B1 354 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 YRDCQ86U90 279 aaKnown RBP5.78□□□□□ -1.48
CSDE1-204ENST00000369530 MUC15Q8N387 334 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 CYB561D1Q8N8Q1 229 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 C1orf162Q8NEQ5 155 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-204ENST00000369530 OR2AJ1Q8NGZ0 328 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 SLAMF6Q96DU3 332 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 EAF1Q96JC9 268 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-204ENST00000369530 MS4A10Q96PG2 267 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 ATP6V0BQ99437 205 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 CABLES2Q9BTV7 478 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 MAP1LC3BQ9GZQ8 125 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 ALKBH4Q9NXW9 302 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 SLC25A15Q9Y619 301 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 SAA2-SAA4A0A096LPE2 208 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 GJE1A6NN92 205 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF732B4DXR9 585 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 TSPAN13O95857 204 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 H2BFMP0C1H6 154 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 CTLA4P16410 223 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 GNB2P62879 340 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 SRPXP78539 464 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 MYBPHQ13203 477 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 PLAC9Q5JTB6 97 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 SLC16A9Q7RTY1 509 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 TMEM144Q7Z5S9 345 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 OR10S1Q8NGN2 331 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 BCL2L2Q92843 193 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-204ENST00000369530 GPR84Q9NQS5 396 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 BET1LQ9NYM9 111 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 B9D1Q9UPM9 204 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 NPIPA3F8WFD2 350 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 TNFRSF13BO14836 293 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-204ENST00000369530 IGFBP3P17936 291 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-204ENST00000369530 UCP1P25874 307 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 FKBP2P26885 142 aaKnown RBP5.78□□□□□ -1.48
CSDE1-204ENST00000369530 DAP3P51398 398 aaKnown RBP5.78□□□□□ -1.48
CSDE1-204ENST00000369530 C2orf76Q3KRA6 126 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 UFSP1Q6NVU6 142 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 OR4F17Q8NGA8 305 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 OR4F4Q96R69 305 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 ABHD6Q9BV23 337 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 RBM24Q9BX46 236 aaKnown RBP5.78□□□□□ -1.48
CSDE1-204ENST00000369530 NAT8Q9UHE5 227 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 SLC22A13Q9Y226 551 aa5.78□□□□□ -1.48
CSDE1-204ENST00000369530 E5RGE8 158 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 TRAPPC2LH3BP13 241 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 H7BYZ3 331 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms