RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TNRC18O15417 2968 aaPredicted RBP11.94□□□□□ -0.5
CD48-201ENST00000368045 WISP2O76076 250 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 PTBP3O95758 552 aaKnown RBP11.94□□□□□ -0.5
CD48-201ENST00000368045 IGLV1-44P01699 117 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 GCH1P30793 250 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 TMEM249Q2WGJ8 235 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 SPNS3Q6ZMD2 512 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 BEND4Q6ZU67 534 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 FAM90A1Q86YD7 464 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 MED12LQ86YW9 2145 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 TGIF2LYQ8IUE0 185 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 HIST3H2BBQ8N257 126 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 FAM169BQ8N8A8 192 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 CNEP1R1Q8N9A8 125 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 DIRC2Q96SL1 478 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 PYGO2Q9BRQ0 406 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 NPCDR1Q9BY65 106 aa11.94□□□□□ -0.5
CD48-201ENST00000368045 SMCO3A2RU48 225 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 PRR33A8MZF0 331 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 ZG16O60844 167 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 RPP30P78346 268 aaKnown RBP11.93□□□□□ -0.5
CD48-201ENST00000368045 BSXQ3C1V8 233 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 ACOT6Q3I5F7 207 aaPredicted RBP11.93□□□□□ -0.5
CD48-201ENST00000368045 Q3ZCU0 254 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 PRAMEF6Q5VXH4 476 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 FAM180AQ6UWF9 173 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 IGFL2Q6UWQ7 119 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 Q6ZR03 302 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 CXorf67Q86X51 503 aaPredicted RBP11.93□□□□□ -0.5
CD48-201ENST00000368045 OR10A7Q8NGE5 316 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 OR13A1Q8NGR1 328 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 SARAFQ96BY9 339 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 SRD5A3Q9H8P0 318 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 SLC25A22Q9H936 323 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 WDFY3Q8IZQ1 3526 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 ESPL1Q14674 2120 aa11.93□□□□□ -0.5
CD48-201ENST00000368045 OR5H1A6NKK0 313 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 C15orf65H3BRN8 121 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 PHOX2AO14813 284 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 AGFG2O95081 481 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 CD55P08174 381 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 CECR9P0C854 216 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 TRGC1P0CF51 173 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 GZMHP20718 246 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 ADIRFQ15847 76 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 LURAP1LQ8IV03 231 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 ABHD5Q8WTS1 349 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 FRZBQ92765 325 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 PLSCR4Q9NRQ2 329 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 PSG11Q9UQ72 335 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 MED13Q9UHV7 2174 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 TRAV17A0A0B4J275 112 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 MARCH11A6NNE9 402 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 LINC00473A8K010 186 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 RBFOX2O43251 390 aaKnown RBP eCLIP11.92□□□□□ -0.5
CD48-201ENST00000368045 RBMXL2O75526 392 aaKnown RBP11.92□□□□□ -0.5
CD48-201ENST00000368045 VENTXO95231 258 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 PFN1P07737 140 aaKnown RBP11.92□□□□□ -0.5
CD48-201ENST00000368045 SSTR5P35346 364 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 PYY3Q5JQD4 70 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 BTNL3Q6UXE8 466 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 C9orf106Q8NAJ2 232 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 PPP1R35Q8TAP8 253 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 RAB24Q969Q5 203 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 R3HDM4Q96D70 268 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 NEIL1Q96FI4 390 aaPredicted RBP11.92□□□□□ -0.5
CD48-201ENST00000368045 JPT1Q9UK76 154 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 PITPNC1Q9UKF7 332 aa11.92□□□□□ -0.5
CD48-201ENST00000368045 IGHV2OR16-5A0A0B4J2B6 119 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 MPDU1O75352 247 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 PRDX2P32119 198 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 CFHR2P36980 270 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 GPR12P47775 334 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 RPL23P62829 140 aaKnown RBP11.91□□□□□ -0.5
CD48-201ENST00000368045 TFF3Q07654 80 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 FOXF2Q12947 444 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 P2RY6Q15077 328 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 CR1LQ2VPA4 569 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 VWA1Q6PCB0 445 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 C16orf82Q7Z2V1 217 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 OR52E5Q8NH55 327 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 LRRC29Q8WV35 223 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 ANAPC16Q96DE5 110 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 OR5B12Q96R08 314 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 UFSP2Q9NUQ7 469 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 WDR83OSQ9Y284 106 aa11.91□□□□□ -0.5
CD48-201ENST00000368045 C15orf62A8K5M9 175 aa11.9□□□□□ -0.5
CD48-201ENST00000368045 H7BYZ3 331 aa11.9□□□□□ -0.5
CD48-201ENST00000368045 ST8SIA5O15466 376 aa11.9□□□□□ -0.5
CD48-201ENST00000368045 HPRT1P00492 218 aa11.9□□□□□ -0.5
CD48-201ENST00000368045 KIR2DS2P43631 304 aa11.9□□□□□ -0.5
CD48-201ENST00000368045 SPCS3P61009 180 aa11.9□□□□□ -0.5
CD48-201ENST00000368045 PDLIM3Q53GG5 364 aaPredicted RBP11.9□□□□□ -0.5
CD48-201ENST00000368045 FAM53AQ6NSI3 398 aaPredicted RBP11.9□□□□□ -0.5
CD48-201ENST00000368045 CD177Q8N6Q3 437 aa11.9□□□□□ -0.5
CD48-201ENST00000368045 RAB1CQ92928 201 aa11.9□□□□□ -0.5
CD48-201ENST00000368045 RPUSD4Q96CM3 377 aaKnown RBP11.9□□□□□ -0.5
CD48-201ENST00000368045 SSX3Q99909 188 aa11.9□□□□□ -0.5
CD48-201ENST00000368045 PARLQ9H300 379 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms