RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PTBP3O95758 552 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 PLAUP00749 431 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 GAPDHP04406 335 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 SRPXP78539 464 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 ACP7Q6ZNF0 438 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 NEUROG1Q92886 237 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 C3orf80F5H4A9 247 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 PHOX2AO14813 284 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 IFNA17P01571 189 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 LRP11Q86VZ4 500 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 PLPPR1Q8TBJ4 325 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 MSI2Q96DH6 328 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 C18orf12Q96KH6 178 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 SCRT1Q9BWW7 348 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 C19orf12Q9NSK7 152 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 MBNL3Q9NUK0 354 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 TAAR3PQ9P1P4 343 aa11.6□□□□□ -0.55
CSNK1E-201ENST00000359867 DEFB108AA8MXU0 73 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 IFNL4K9M1U5 179 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 CEBPGP53567 150 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 KLF3P57682 345 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 PRAMEF6Q5VXH4 476 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 MEX3BQ6ZN04 569 aaKnown RBP11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 ZNF826PQ6ZT77 177 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 H1FOOQ8IZA3 346 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 FAM213BQ8TBF2 198 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 DUSP13Q9UII6 198 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 IGLV3-9A0A075B6K5 115 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 C3orf85A0A1B0GTC6 90 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 A1L4Q6 167 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 J3QKU1 62 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 DANCRP0C864 163 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 RPS10P46783 165 aaKnown RBP11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 LYPD6BQ8NI32 183 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 TMEM171Q8WVE6 324 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 RARRES2Q99969 163 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 TMEM208Q9BTX3 173 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 NDUFAF3Q9BU61 184 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 SNHG12Q9BXW3 62 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 TUBA4BQ9H853 241 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 TRAPPC2LQ9UL33 140 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 OR2W1Q9Y3N9 320 aa11.59□□□□□ -0.55
CSNK1E-201ENST00000359867 IGHV3-64DA0A0J9YX35 117 aa11.58□□□□□ -0.55
CSNK1E-201ENST00000359867 E5RGE8 158 aa11.58□□□□□ -0.55
CSNK1E-201ENST00000359867 FABP4P15090 132 aa11.58□□□□□ -0.55
CSNK1E-201ENST00000359867 CFHR2P36980 270 aa11.58□□□□□ -0.55
CSNK1E-201ENST00000359867 SMIM21Q3B7S5 101 aa11.58□□□□□ -0.55
CSNK1E-201ENST00000359867 SLC35E4Q6ICL7 350 aa11.58□□□□□ -0.55
CSNK1E-201ENST00000359867 PLEKHA2Q9HB19 425 aa11.58□□□□□ -0.55
CSNK1E-201ENST00000359867 NSG2Q9Y328 171 aa11.58□□□□□ -0.55
CSNK1E-201ENST00000359867 PUS1Q9Y606 427 aaKnown RBP eCLIP11.58□□□□□ -0.55
CSNK1E-201ENST00000359867 CRYBG3Q68DQ2 2970 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 BORCS7-ASMTA0A0B4J1R7 106 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 SHISA9B4DS77 424 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 PHF1O43189 567 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 DLEU1O43261 78 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 CD3EP07766 207 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 S100GP29377 79 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 SULT1A1P50225 295 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 MAJINQ3KP22 176 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 FAM90A1Q86YD7 464 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 CMTM1Q8IZ96 169 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 ZNF664Q8N3J9 261 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 OR2Z1Q8NG97 314 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 GPHA2Q96T91 129 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 ABHD14AQ9BUJ0 271 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 OR14J1Q9UGF5 321 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 TMED3Q9Y3Q3 217 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 POMT1Q9Y6A1 747 aa11.58□□□□□ -0.56
CSNK1E-201ENST00000359867 TMEM30CPA0ZSE6 113 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 A6NNC1 897 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 WNT9BO14905 357 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 NXPH3O95157 252 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 IGFBP2P18065 325 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 OMGP23515 440 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 SELENOVP59797 346 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 HMGN3Q15651 99 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 ZNF818PQ6ZRF7 136 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 TBC1D26Q86UD7 250 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 C1QL4Q86Z23 238 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST3H2BBQ8N257 126 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 TMEM222Q9H0R3 208 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 IGKV1D-13A0A0B4J2D9 117 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 PIGBOS1A0A0B4J2F0 54 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 IGKV1-13P0DP09 117 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 P2RY1P47900 373 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 MRPS11P82912 194 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 TMEM56Q96MV1 263 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 TP53RKQ96S44 253 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 TMEM56-RWDD3S4R434 201 aa11.57□□□□□ -0.56
CSNK1E-201ENST00000359867 DUXBA0A1W2PPF3 345 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 GPR137BO60478 399 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 PSPNO60542 156 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 WNT2P09544 360 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 LOXP28300 417 aaPredicted RBP11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 IL2RGP31785 369 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 CCL20P78556 96 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 NUP37Q8NFH4 326 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 RAB24Q969Q5 203 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms