RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 LINC01587Q99440 93 aa8.82□□□□□ -1
CLIP1-202ENST00000358808 ZNF430Q9H8G1 570 aaPredicted RBP8.82□□□□□ -1
CLIP1-202ENST00000358808 CYB5R1Q9UHQ9 305 aa8.82□□□□□ -1
CLIP1-202ENST00000358808 MRM2Q9UI43 246 aaKnown RBP8.82□□□□□ -1
CLIP1-202ENST00000358808 CRPP02741 224 aa8.82□□□□□ -1
CLIP1-202ENST00000358808 TRGV3P03979 118 aa8.82□□□□□ -1
CLIP1-202ENST00000358808 RND2P52198 227 aa8.82□□□□□ -1
CLIP1-202ENST00000358808 CD69Q07108 199 aa8.82□□□□□ -1
CLIP1-202ENST00000358808 RBBP6Q7Z6E9 1792 aaKnown RBP8.81□□□□□ -1
CLIP1-202ENST00000358808 SLC25A17O43808 307 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 FOXH1O75593 365 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 HOXB3P14651 431 aaPredicted RBP8.81□□□□□ -1
CLIP1-202ENST00000358808 NPBWR2P48146 333 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 EFNB2P52799 333 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 TMEM177Q53S58 311 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 LINC01555Q8NAE3 123 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 OR4D5Q8NGN0 318 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 SRSF12Q8WXF0 261 aaKnown RBP8.81□□□□□ -1
CLIP1-202ENST00000358808 IDI2-AS1Q9NZ38 188 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 IGHV3-66A0A0C4DH42 116 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 H7C1H1 209 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 IGHV3-23P01764 117 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 ASAH2BP0C7U1 165 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 CNTFRP26992 372 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 FAM60AQ9NP50 221 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 FGF5P12034 268 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 CTSSP25774 331 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 NRN1LQ496H8 165 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 ZNF418Q8TF45 676 aaPredicted RBP8.81□□□□□ -1
CLIP1-202ENST00000358808 JKAMPQ9P055 326 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 FOXI3A8MTJ6 420 aaPredicted RBP8.81□□□□□ -1
CLIP1-202ENST00000358808 H3BRM9 83 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 NKX2-8O15522 239 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 CD1AP06126 327 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 HKR1P10072 659 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 MBD3L1Q8WWY6 194 aa8.81□□□□□ -1
CLIP1-202ENST00000358808 RBM38Q9H0Z9 239 aaKnown RBP8.81□□□□□ -1
CLIP1-202ENST00000358808 LTBP1Q14766 1721 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 CRYBB2P43320 205 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 MVDP53602 400 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 ISXQ2M1V0 245 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 TMEM95Q3KNT9 176 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 ABHD12Q8N2K0 398 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 NEU3Q9UQ49 428 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 H3BTX0 84 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 C1QL3Q5VWW1 255 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 C17orf47Q8NEP4 570 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 LRRC3BQ96PB8 259 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 TRBV20OR9-2A0A075B6H5 130 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 IGHV3OR16-13A0A075B7E8 117 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 IGHV3-74A0A0B4J1X5 117 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 IGHV3-35A0A0C4DH35 117 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 ZNHIT1O43257 154 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 HOXA3O43365 443 aaPredicted RBP8.8□□□□□ -1
CLIP1-202ENST00000358808 NDUFA2O43678 99 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 SELENOTP62341 195 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 MGAT2Q10469 447 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 FAM209BQ5JX69 171 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 PNKDQ8N490 385 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 ADAD2Q8NCV1 583 aaKnown RBP8.8□□□□□ -1
CLIP1-202ENST00000358808 LOXL4Q96JB6 756 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 CALYQ9NYX4 217 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 DSPPQ9NZW4 1301 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 A0A1W2PQM1 296 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 NPIPB11E5RHQ5 1161 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 PITX3O75364 302 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 AMY1AP04745 511 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 FXYD3Q14802 87 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 FAM214BQ7L5A3 538 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 ZNF645Q8N7E2 425 aa8.8□□□□□ -1
CLIP1-202ENST00000358808 PRR19A6NJB7 356 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 PROB1E7EW31 1015 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 MEF2CQ06413 473 aaPredicted RBP8.79□□□□□ -1
CLIP1-202ENST00000358808 P2RY6Q15077 328 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 TCF24Q7RTU0 167 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 MSRB3Q8IXL7 192 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 COX14Q96I36 57 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 LOC285556D6RIA3 1793 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 TRAV21A0A0B4J279 112 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 PRR33A8MZF0 331 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 LEPROTL1O95214 131 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 ASXL3Q9C0F0 2248 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 KIF13BQ9NQT8 1826 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 AHRRA9YTQ3 701 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 MPV17P39210 176 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 PCOLCEQ15113 449 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 KIR3DL3Q8N743 410 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 GDF15Q99988 308 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 HSPB9Q9BQS6 159 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 NAT1P18440 290 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 RBM11P57052 281 aaKnown RBP8.79□□□□□ -1
CLIP1-202ENST00000358808 FRRS1LQ9P0K9 344 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 IGKV3D-20A0A0C4DH25 116 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 LINC00862A6NCI5 91 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 NDUFB4O95168 129 aa8.79□□□□□ -1
CLIP1-202ENST00000358808 FGF9P31371 208 aaPredicted RBP8.79□□□□□ -1
CLIP1-202ENST00000358808 IGLV3-16A0A075B6K0 115 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 ATG4DQ86TL0 474 aaPredicted RBP8.78□□□□□ -1
CLIP1-202ENST00000358808 RBKSQ9H477 322 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 TMEM160Q9NX00 188 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms