RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MRPL30Q8TCC3 161 aaKnown RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 NR4A3Q92570 626 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 AP3S1Q92572 193 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 RND1Q92730 232 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 C18orf12Q96KH6 178 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 SSBP4Q9BWG4 385 aaPredicted RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 LOC102724200A0A096LPH7 203 aaPredicted RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 FABP4P15090 132 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 CCL3L1P16619 93 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 OTX2P32243 289 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 RIDAP52758 137 aaKnown RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 IL13RA2Q14627 380 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 IQCJQ1A5X6 159 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 THEM4Q5T1C6 240 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 FBXW12Q6X9E4 464 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 GPR137CQ8N3F9 429 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 TMEM251Q8N6I4 163 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 CD177Q8N6Q3 437 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 STPG4Q8N801 248 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 DEFB108BQ8NET1 73 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 RASSF5Q8WWW0 418 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 ALKBH4Q9NXW9 302 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 PRELID3BQ9Y3B1 194 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 PTRH2Q9Y3E5 179 aaKnown RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 TRAV34A0A0B4J273 112 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 UBE2CO00762 179 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 DHHO43323 396 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 RAB5AP20339 215 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 MNDAP41218 407 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 SULT1A2P50226 295 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 CLDN18P56856 261 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 ARF1P84077 181 aaKnown RBP4.54□□□□□ -1.68
CD47-201ENST00000355354 EIF4EBP1Q13541 118 aaPredicted RBP4.54□□□□□ -1.68
CD47-201ENST00000355354 OR8G2PQ6IF36 304 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 HIST2H3AQ71DI3 136 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 SULF2Q8IWU5 870 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 SLC22A24Q8N4F4 322 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 TMEM229BQ8NBD8 167 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 ADPRHL1Q8NDY3 354 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 M1APQ8TC57 530 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 FOXC2Q99958 501 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 SLC25A21Q9BQT8 299 aaPredicted RBP4.54□□□□□ -1.68
CD47-201ENST00000355354 NRN1Q9NPD7 142 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 LCATP04180 440 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 IGF1P05019 195 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 P0C879 139 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 G0S2P27469 103 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 ZP4Q12836 540 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 ABHD17BQ5VST6 288 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 PRSS54Q6PEW0 395 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 PNKDQ8N490 385 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 DRAM1Q8N682 238 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 RYDENQ9NUL5 291 aaKnown RBP4.54□□□□□ -1.68
CD47-201ENST00000355354 GNG13Q9P2W3 67 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 PRSS46E5RG02 174 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 TUSC2O75896 110 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 PRH1P02810 166 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 REG1AP05451 166 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 PVALBP20472 110 aaPredicted RBP4.54□□□□□ -1.68
CD47-201ENST00000355354 CEACAM8P31997 349 aaPredicted RBP4.54□□□□□ -1.68
CD47-201ENST00000355354 TCL1AP56279 114 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 ZNF766Q5HY98 468 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 FAM122CQ6P4D5 195 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 MTURNQ8N3F0 131 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 TMEM116Q8NCL8 245 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 RPUSD4Q96CM3 377 aaKnown RBP4.54□□□□□ -1.68
CD47-201ENST00000355354 PBDC1Q9BVG4 233 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.54□□□□□ -1.68
CD47-201ENST00000355354 ODAMA1E959 279 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 FSTL3O95633 263 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 OR10J4P0C629 311 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 CCL1P22362 96 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 GPR6P46095 362 aaPredicted RBP4.54□□□□□ -1.68
CD47-201ENST00000355354 EGR3Q06889 387 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 Q6ZS46 218 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 THNSL2Q86YJ6 484 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 DOLPP1Q86YN1 238 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 SAMD14Q8IZD0 417 aaPredicted RBP4.54□□□□□ -1.68
CD47-201ENST00000355354 GPR35Q9HC97 309 aa4.54□□□□□ -1.68
CD47-201ENST00000355354 OR5H1A6NKK0 313 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 C12orf77C9JDV5 145 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 MKRN2OSH3BPM6 223 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 PDCD6O75340 191 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 IGLV2-8P01709 118 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 COX5BP10606 129 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 HLA-DMBP28068 263 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 GNB1P62873 340 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 ARSJQ5FYB0 599 aaPredicted RBP4.53□□□□□ -1.68
CD47-201ENST00000355354 A0A0U1RQK1 487 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 ZNF320A2RRD8 509 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 C15orf62A8K5M9 175 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 SS18L1O75177 396 aaPredicted RBP4.53□□□□□ -1.68
CD47-201ENST00000355354 ZNF10P21506 573 aaPredicted RBP4.53□□□□□ -1.68
CD47-201ENST00000355354 NDUFA6P56556 154 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 HIST1H3AP68431 136 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 PNLIPRP3Q17RR3 467 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 HIST2H3PS2Q5TEC6 136 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 WNT10AQ9GZT5 417 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 IRGMA1A4Y4 181 aa4.53□□□□□ -1.68
CD47-201ENST00000355354 AQP7P3A6NL99 342 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms