RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 IGKV1D-39P04432 117 aa6.46□□□□□ -1.37
BRCA1-201ENST00000352993 CCL2P13500 99 aa6.46□□□□□ -1.37
BRCA1-201ENST00000352993 TNFSF4P23510 183 aa6.46□□□□□ -1.37
BRCA1-201ENST00000352993 HIST3H3Q16695 136 aa6.46□□□□□ -1.37
BRCA1-201ENST00000352993 ACSF3Q4G176 576 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-201ENST00000352993 PDLIM3Q53GG5 364 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-201ENST00000352993 MRPL54Q6P161 138 aaKnown RBP6.46□□□□□ -1.37
BRCA1-201ENST00000352993 OR1L1Q8NH94 360 aa6.46□□□□□ -1.37
BRCA1-201ENST00000352993 ST6GALNAC6Q969X2 333 aa6.46□□□□□ -1.37
BRCA1-201ENST00000352993 LIN7CQ9NUP9 197 aaKnown RBP6.46□□□□□ -1.37
BRCA1-201ENST00000352993 TRAPPC2LQ9UL33 140 aa6.46□□□□□ -1.37
BRCA1-201ENST00000352993 TNFSF11O14788 317 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 CD99P14209 185 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 RPEL1Q2QD12 228 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 FAM122AQ96E09 287 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 NPCDR1Q9BY65 106 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 IL23AQ9NPF7 189 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 TIMM9Q9Y5J7 89 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 REV3LO60673 3130 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 IGHV3-64DA0A0J9YX35 117 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 MLNRO43193 412 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 ZG16O60844 167 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 GLB1P16278 677 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 TMEM11P17152 192 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 TSPOP30536 169 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 SRIP30626 198 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 OTX1P32242 354 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-201ENST00000352993 LINC00310P59036 64 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 YPEL3P61236 119 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-201ENST00000352993 FAM27BQ5VT28 67 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 OR4A47Q6IF82 309 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 RHBDD2Q6NTF9 364 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 C20orf204Q6ZNR8 217 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 MRPL21Q7Z2W9 205 aaKnown RBP6.46□□□□□ -1.38
BRCA1-201ENST00000352993 ZNF439Q8NDP4 499 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 LSM10Q969L4 123 aaKnown RBP6.46□□□□□ -1.38
BRCA1-201ENST00000352993 ZDHHC16Q969W1 377 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 WDR87Q6ZQQ6 2873 aa6.46□□□□□ -1.38
BRCA1-201ENST00000352993 PRUNE2Q8WUY3 3088 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 USF3Q68DE3 2245 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 ZFAND5O76080 213 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 IGHV4-34P06331 123 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 C3orf79P0CE67 100 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 GABRG2P18507 467 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 TIMP3P35625 211 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 PSG4Q00888 419 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 RIPPLY2Q5TAB7 128 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 ASCL4Q6XD76 172 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 SYT13Q7L8C5 426 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 MMD2Q8IY49 270 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 IL36BQ9NZH7 164 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 CHD9Q3L8U1 2897 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 LOC105371242A0A075B767 164 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 RNF212BA8MTL3 300 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 DLL1O00548 723 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 SYNGR3O43761 229 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 ARL14EPLP0DKL9 152 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 GABRA2P47869 451 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 RELBQ01201 579 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 C10orf128Q5T292 105 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 ANKRD37Q7Z713 158 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 OR5A2Q8NGI9 324 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 KCNIP2Q9NS61 270 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 IL36GQ9NZH8 169 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 RPH3ALQ9UNE2 315 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 TIMM8BQ9Y5J9 83 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-201ENST00000352993 hCG_38984A0A1B0GV85 526 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 SYNGR1O43759 233 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 HSBP1O75506 76 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 MGST1P10620 155 aaKnown RBP6.45□□□□□ -1.38
BRCA1-201ENST00000352993 FASLGP48023 281 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 COMPP49747 757 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-201ENST00000352993 FGF12P61328 243 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 FXYD3Q14802 87 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 CEACAM16Q2WEN9 425 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-201ENST00000352993 KIAA0895LQ68EN5 471 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 AAED1Q7RTV5 226 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 NUDT10Q8NFP7 164 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 GCM1Q9NP62 436 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 C19orf25Q9UFG5 118 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-201ENST00000352993 WASHC3Q9Y3C0 194 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 SPEGQ15772 3267 aa6.45□□□□□ -1.38
BRCA1-201ENST00000352993 CRYGSP22914 178 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 GFRA1P56159 465 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 ZNF324BQ6AW86 544 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-201ENST00000352993 C7orf61Q8IZ16 206 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 DOCK7Q96N67 2140 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 RCHY1Q96PM5 261 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 MTCH1Q9NZJ7 389 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 CLCF1Q9UBD9 225 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 SELENOKQ9Y6D0 94 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 TRBV20OR9-2A0A075B6H5 130 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 A0A1W2PRS3 328 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 DEGS1O15121 323 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 PSG1P11464 419 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 DUSP3P51452 185 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-201ENST00000352993 PRR27Q6MZM9 219 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 PCSK4Q6UW60 755 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 TMEM14EPQ6UXP3 125 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms