RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 EIF5AL1Q6IS14 154 aaKnown RBP6.77□□□□□ -1.33
CD44-205ENST00000352818 MOGAT3Q86VF5 341 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 CD177Q8N6Q3 437 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 OR52M1Q8NGK5 317 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 ITLN1Q8WWA0 313 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 IL1F10Q8WWZ1 152 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 TAF15Q92804 592 aaKnown RBP eCLIP6.77□□□□□ -1.33
CD44-205ENST00000352818 GALMQ96C23 342 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 SDSLQ96GA7 329 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 ARV1Q9H2C2 271 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 RAB9BQ9NP90 201 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 SDHAF2Q9NX18 166 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 DUSP13Q9UII6 198 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 RCL1Q9Y2P8 373 aaKnown RBP6.77□□□□□ -1.33
CD44-205ENST00000352818 LSM5Q9Y4Y9 91 aaKnown RBP6.77□□□□□ -1.33
CD44-205ENST00000352818 SESN1Q9Y6P5 492 aa6.77□□□□□ -1.33
CD44-205ENST00000352818 IGHV3-64DA0A0J9YX35 117 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 DPRXA6NFQ7 191 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 SHISA9B4DS77 424 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 C15orf65H3BRN8 121 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 K7N7A8 449 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 ITGB1BP1O14713 200 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 SHOXO15266 292 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 SPINT2O43291 252 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 PITX3O75364 302 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 JTBO76095 146 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 SCGB1D2O95969 90 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 HBZP02008 142 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 SERPINE2P07093 398 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 PVALBP20472 110 aaPredicted RBP6.76□□□□□ -1.33
CD44-205ENST00000352818 ZP3P21754 424 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 NKX2-1P43699 371 aaPredicted RBP6.76□□□□□ -1.33
CD44-205ENST00000352818 TNFAIP6P98066 277 aaPredicted RBP6.76□□□□□ -1.33
CD44-205ENST00000352818 ID3Q02535 119 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 FOXL1Q12952 345 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 GNMTQ14749 295 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 TMEM30BQ3MIR4 351 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 TEX36Q5VZQ5 186 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 ZNF561Q8N587 486 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 DRAM1Q8N682 238 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 UBAC2Q8NBM4 344 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 DMBX1Q8NFW5 382 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 OR13A1Q8NGR1 328 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 OR1L1Q8NH94 360 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 ZNF418Q8TF45 676 aaPredicted RBP6.76□□□□□ -1.33
CD44-205ENST00000352818 RNF141Q8WVD5 230 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 SAT2Q96F10 170 aaPredicted RBP6.76□□□□□ -1.33
CD44-205ENST00000352818 FAM234AQ9H0X4 552 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 NGBQ9NPG2 151 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 COA4Q9NYJ1 87 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 RNF7Q9UBF6 113 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 FBXL17Q9UF56 701 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 JPT1Q9UK76 154 aa6.76□□□□□ -1.33
CD44-205ENST00000352818 HEATR1Q9H583 2144 aaKnown RBP6.76□□□□□ -1.33
CD44-205ENST00000352818 TRAV39A0A0B4J263 110 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 ODAMA1E959 279 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 RAB19A4D1S5 217 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 KRBOX1C9JBD0 128 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 I3L521 148 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 F2RL2O00254 374 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 ADAM20O43506 726 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 SPRY3O43610 288 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 CGB3P0DN86 165 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 CGB7P0DN87 165 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 MUC1P15941 1255 aaPredicted RBP6.75□□□□□ -1.33
CD44-205ENST00000352818 TNFRSF1AP19438 455 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 GZMHP20718 246 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 GLIPR1P48060 266 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 TMEM33P57088 247 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 BAXQ07812 192 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 AESQ08117 197 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 CATR1Q13166 79 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 ADIPOQQ15848 244 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 FAM209AQ5JX71 171 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 FAM74A1Q5RGS3 127 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 STUMQ69YW2 141 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 RPL7L1Q6DKI1 246 aaKnown RBP6.75□□□□□ -1.33
CD44-205ENST00000352818 VHLLQ6RSH7 139 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 UQCC3Q6UW78 93 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 ZNF66Q6ZN08 573 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 FAM219AQ8IW50 185 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 CCDC28AQ8IWP9 274 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 OR2C3Q8N628 320 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 OR51H1Q8NH63 302 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 MRGPRDQ8TDS7 321 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 PCNPQ8WW12 178 aaKnown RBP6.75□□□□□ -1.33
CD44-205ENST00000352818 EDARADDQ8WWZ3 215 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 SLC25A31Q9H0C2 315 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 GCM1Q9NP62 436 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 ZC4H2Q9NQZ6 224 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 LYRM2Q9NU23 88 aaPredicted RBP6.75□□□□□ -1.33
CD44-205ENST00000352818 CISD1Q9NZ45 108 aaKnown RBP6.75□□□□□ -1.33
CD44-205ENST00000352818 OR6C3Q9NZP0 311 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 RBM7Q9Y580 266 aaKnown RBP6.75□□□□□ -1.33
CD44-205ENST00000352818 TANC2Q9HCD6 1990 aa6.75□□□□□ -1.33
CD44-205ENST00000352818 BORCS7-ASMTA0A0B4J1R7 106 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 VSTM5A8MXK1 200 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 FAM90A26D6RGX4 464 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 ABCD4O14678 606 aa6.74□□□□□ -1.33
CD44-205ENST00000352818 TNFSF12O43508 249 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms