RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 OOSP2Q86WS3 158 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 LINC00346Q8IVM7 164 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 C1orf174Q8IYL3 243 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 LYG1Q8N1E2 194 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 TMEM256Q8N2U0 113 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 ZNF709Q8N972 641 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 GATSQ8NAP1 163 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 OR51E1Q8TCB6 317 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 VN1R17PQ8TDU5 208 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 LHX4Q969G2 390 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 APH1AQ96BI3 265 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 REEP6Q96HR9 211 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 RAB40CQ96S21 281 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 HSPB9Q9BQS6 159 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 TMEM222Q9H0R3 208 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 CSTL1Q9H114 145 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 ZDHHC11Q9H8X9 412 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 OBP2BQ9NPH6 170 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 RPRMQ9NS64 109 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 SLC39A9Q9NUM3 307 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 PLEKHJ1Q9NW61 149 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 MRPL27Q9P0M9 148 aaKnown RBP6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 NXT1Q9UKK6 140 aaKnown RBP6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 RFNGQ9Y644 331 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 WDFY4Q6ZS81 3184 aa6.48□□□□□ -1.37
UBE2D3-204ENST00000349311 IGKV1D-8A0A087WSZ0 117 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 TMED7-TICAM2A0A0A6YYA0 188 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 IGHV2OR16-5A0A0B4J2B6 119 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 IGHV1-69-2A0A0G2JMI3 117 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 A0A1W2PP11 408 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 ZNF814B7Z6K7 855 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 NPIPA2E9PIF3 369 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 HS3ST1O14792 307 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 CST7O76096 145 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 MPZL1O95297 269 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 NUDT14O95848 222 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 IGLC2P0DOY2 106 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 IGLC3P0DOY3 106 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 SLC25A6P12236 298 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 CRISP2P16562 243 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 BMI1P35226 326 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 CTRLP40313 264 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 FXYD4P59646 89 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 HBG1P69891 147 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 HBG2P69892 147 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 Q0VG73 95 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 FUT7Q11130 342 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 ZNF154Q13106 437 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 DAZAP2Q15038 168 aaPredicted RBP6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 MMDQ15546 238 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 EXT1Q16394 746 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 MAJINQ3KP22 176 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 COX19Q49B96 90 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 OTPQ5XKR4 325 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 ABHD12BQ7Z5M8 362 aaPredicted RBP6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 WDFY1Q8IWB7 410 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 SELENOHQ8IZQ5 122 aaKnown RBP6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 C17orf78Q8N4C9 275 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 SIGLECL1Q8N7X8 197 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 OR1L6Q8NGR2 347 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 MRPL30Q8TCC3 161 aaKnown RBP6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 PP6455Q8WZ26 134 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 C11orf40Q8WZ69 217 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 RPUSD4Q96CM3 377 aaKnown RBP6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 C10orf35Q96D05 121 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 SPACA5Q96QH8 159 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 SAMD10Q9BYL1 202 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 PARLQ9H300 379 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 PATZ1Q9HBE1 687 aaKnown RBP6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 PRTFDC1Q9NRG1 225 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 TUBG2Q9NRH3 451 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 KLHL13Q9P2N7 655 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 MCTS1Q9ULC4 181 aaKnown RBP6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 KIAA2026Q5HYC2 2103 aa6.47□□□□□ -1.37
UBE2D3-204ENST00000349311 SAA2-SAA4A0A096LPE2 208 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 TRBV9A0A0B4J1U6 114 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 CTXND1A0A1B0GTU2 59 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 MDFIC2A0A1B0GVS7 189 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 A0A1W2PQD3 144 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 ADAM20O43506 726 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 TRAPPC6AO75865 159 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 IGHEP01854 428 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 VDAC1P21796 283 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 GCH1P30793 250 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 CAPZBP47756 277 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 GRB2P62993 217 aaKnown RBP6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 RHOGP84095 191 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 TLE3Q04726 772 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 FMODQ06828 376 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 KISS1Q15726 138 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 LRRC75BQ2VPJ9 315 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 OCIAD2Q56VL3 154 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 LYSMD4Q5XG99 296 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 FAM57BQ71RH2 274 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 KMT5CQ86Y97 462 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 UEVLDQ8IX04 471 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 ODF3L1Q8IXM7 274 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 COL27A1Q8IZC6 1860 aaPredicted RBP6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 TMEM217Q8N7C4 229 aa6.46□□□□□ -1.38
UBE2D3-204ENST00000349311 SUMF1Q8NBK3 374 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms