RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 SCO2A0A1W2PP80 73 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 IGLV3-19P01714 112 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 KLF3P57682 345 aaPredicted RBP12.86□□□□□ -0.35
PTBP1-201ENST00000349038 RANP62826 216 aaKnown RBP12.86□□□□□ -0.35
PTBP1-201ENST00000349038 UBE2V1Q13404 147 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 SSPNQ14714 243 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 PLPPR5Q32ZL2 321 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 STPG3Q8N7X2 389 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 OR10G8Q8NGN5 311 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 BORCS7Q96B45 105 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 SFRP2Q96HF1 295 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 RAB40CQ96S21 281 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 UQCR10Q9UDW1 63 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 MMP17Q9ULZ9 603 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 CTSSP25774 331 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 LRRC75BQ2VPJ9 315 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 NHLRC2Q8NBF2 726 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 SSMEM1Q8WWF3 244 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 MBD3L1Q8WWY6 194 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 C20orf144Q9BQM9 153 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 LRFN3Q9BTN0 628 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 GNB4Q9HAV0 340 aa12.86□□□□□ -0.35
PTBP1-201ENST00000349038 A0A096LPE4 126 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 A0A1W2PPC4 97 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 A0A1W2PPZ6 126 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 ZNF32P17041 273 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 OR1D5P58170 312 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 SELENOTP62341 195 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 HIST3H3Q16695 136 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 SLC25A53Q5H9E4 307 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 C20orf204Q6ZNR8 217 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 ZNF295-AS1Q8N0V1 137 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 OR5L2Q8NGL0 311 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 OR1L1Q8NH94 360 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 RNF138Q8WVD3 245 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 TMEM56Q96MV1 263 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 ARL2-SNX15V9GYD0 113 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 LOC105371242A0A075B767 164 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 DHHO43323 396 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 ACTL6BO94805 426 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 CA1P00915 261 aaPredicted RBP12.85□□□□□ -0.35
PTBP1-201ENST00000349038 GLB1P16278 677 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 CDC34P49427 236 aaPredicted RBP12.85□□□□□ -0.35
PTBP1-201ENST00000349038 RBM11P57052 281 aaKnown RBP12.85□□□□□ -0.35
PTBP1-201ENST00000349038 OCC1Q8TAD7 63 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 ELOVL5Q9NYP7 299 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 TECRQ9NZ01 308 aaKnown RBP12.85□□□□□ -0.35
PTBP1-201ENST00000349038 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 CLDN14O95500 239 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 SRIP30626 198 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 SRP14P37108 136 aaKnown RBP12.85□□□□□ -0.35
PTBP1-201ENST00000349038 RPL15P61313 204 aaKnown RBP12.85□□□□□ -0.35
PTBP1-201ENST00000349038 BCL2L2Q92843 193 aaPredicted RBP12.85□□□□□ -0.35
PTBP1-201ENST00000349038 APOBEC3DQ96AK3 386 aaPredicted RBP12.85□□□□□ -0.35
PTBP1-201ENST00000349038 PINX1Q96BK5 328 aaKnown RBP12.85□□□□□ -0.35
PTBP1-201ENST00000349038 C11orf1Q9H5F2 150 aa12.85□□□□□ -0.35
PTBP1-201ENST00000349038 IGKV1-6A0A0C4DH72 117 aa12.84□□□□□ -0.35
PTBP1-201ENST00000349038 ZNF891A8MT65 544 aaPredicted RBP12.84□□□□□ -0.35
PTBP1-201ENST00000349038 COX5AP20674 150 aa12.84□□□□□ -0.35
PTBP1-201ENST00000349038 UCP1P25874 307 aa12.84□□□□□ -0.35
PTBP1-201ENST00000349038 TEX43Q6ZNM6 134 aa12.84□□□□□ -0.35
PTBP1-201ENST00000349038 TRAV1-1A0A0B4J248 108 aa12.84□□□□□ -0.35
PTBP1-201ENST00000349038 CTXND1A0A1B0GTU2 59 aa12.84□□□□□ -0.35
PTBP1-201ENST00000349038 DPRXA6NFQ7 191 aa12.84□□□□□ -0.35
PTBP1-201ENST00000349038 ZG16O60844 167 aa12.84□□□□□ -0.35
PTBP1-201ENST00000349038 Q6ZSR3 168 aa12.84□□□□□ -0.35
PTBP1-201ENST00000349038 DOLPP1Q86YN1 238 aa12.84□□□□□ -0.35
PTBP1-201ENST00000349038 TCFL5Q9UL49 500 aa12.84□□□□□ -0.35
PTBP1-201ENST00000349038 GFRA1P56159 465 aa12.83□□□□□ -0.35
PTBP1-201ENST00000349038 LINC00310P59036 64 aa12.83□□□□□ -0.35
PTBP1-201ENST00000349038 SERF2P84101 59 aa12.83□□□□□ -0.35
PTBP1-201ENST00000349038 PMCHL1Q16048 86 aa12.83□□□□□ -0.35
PTBP1-201ENST00000349038 ZNF841Q6ZN19 808 aa12.83□□□□□ -0.35
PTBP1-201ENST00000349038 OXGR1Q96P68 337 aa12.83□□□□□ -0.35
PTBP1-201ENST00000349038 CRIM1Q9NZV1 1036 aa12.83□□□□□ -0.35
PTBP1-201ENST00000349038 EXPH5Q8NEV8 1989 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 CACNA1EQ15878 2313 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 A0A0U1RQV5 110 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 CA6P23280 308 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 SLC23A3Q6PIS1 610 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 OR10P1Q8NGE3 313 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 PMCHL2Q9BQD1 86 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 TRBV20OR9-2A0A075B6H5 130 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 WNT2P09544 360 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 FUT6P51993 359 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 RPL19P84098 196 aaKnown RBP12.83□□□□□ -0.36
PTBP1-201ENST00000349038 HOXA4Q00056 320 aaPredicted RBP12.83□□□□□ -0.36
PTBP1-201ENST00000349038 HYAL1Q12794 435 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 OR4B1Q8NGF8 309 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 MTCH1Q9NZJ7 389 aa12.83□□□□□ -0.36
PTBP1-201ENST00000349038 OR2T8A6NH00 312 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 TMEM250H0YL14 139 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 IGLC2P0DOY2 106 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 IGLC3P0DOY3 106 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 SPSB1Q96BD6 273 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 HINT2Q9BX68 163 aa12.82□□□□□ -0.36
PTBP1-201ENST00000349038 A0A1B0GX78 115 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms