RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 UBE2DNLQ8IWF7 75 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 PNKDQ8N490 385 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 CTDSP1Q9GZU7 261 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 MRPS18CQ9Y3D5 142 aaKnown RBP9.32□□□□□ -0.92
CLCN6-202ENST00000346436 FREM3P0C091 2139 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 MST1P26927 711 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 FHITP49789 147 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 OR4A47Q6IF82 309 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 KLF14Q8TD94 323 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-202ENST00000346436 DOCK9Q9BZ29 2069 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 CYB5R3P00387 301 aaPredicted RBP9.31□□□□□ -0.92
CLCN6-202ENST00000346436 MFAP4P55083 255 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 RUNX1Q01196 453 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 AESQ08117 197 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 IL22RA2Q969J5 263 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 AKIRIN1Q9H9L7 192 aaPredicted RBP9.31□□□□□ -0.92
CLCN6-202ENST00000346436 TMEM167BQ9NRX6 74 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 B4DSR2 109 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 E9PQ18 207 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 KLK2P20151 261 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 G0S2P27469 103 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 UQCRFS1P47985 274 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 REG1BP48304 166 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 EFNA4P52798 201 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 PLAC9Q5JTB6 97 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 BLNKQ8WV28 456 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 TOLLIPQ9H0E2 274 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 TCRBV4S1A1TA0A5B7 111 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 EWSR1Q01844 656 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLCN6-202ENST00000346436 UBE2V2Q15819 145 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 ZNF385CQ66K41 422 aaPredicted RBP9.31□□□□□ -0.92
CLCN6-202ENST00000346436 MARVELD3Q96A59 401 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 TECRQ9NZ01 308 aaKnown RBP9.31□□□□□ -0.92
CLCN6-202ENST00000346436 RBFOX3A6NFN3 312 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 NPIPB6E9PJ23 425 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 K7ENP7 123 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 NTN3O00634 580 aaPredicted RBP9.31□□□□□ -0.92
CLCN6-202ENST00000346436 AMMECR1LQ6DCA0 310 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 NTNG2Q96CW9 530 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 LINC00271P0C7V0 271 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 PPOXP50336 477 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 TCTEX1D1Q8N7M0 179 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 PRO1933Q9H354 126 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 DPM3Q9P2X0 92 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 TMEM56-RWDD3S4R434 201 aa9.31□□□□□ -0.92
CLCN6-202ENST00000346436 ZNF98A6NK75 572 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 CD74P04233 296 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 FCGR3AP08637 254 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 SULT1A1P50225 295 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 LRRC75BQ2VPJ9 315 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 SAMD13Q5VXD3 122 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 ANAPC1Q9H1A4 1944 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.3□□□□□ -0.92
CLCN6-202ENST00000346436 DHRS7CA6NNS2 312 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 HLA-GP17693 338 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 VAX1Q5SQQ9 334 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 TMEM78Q5T7P6 136 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 A0A0U1RQV5 110 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 HKR1P10072 659 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 UBE2L3P68036 154 aaKnown RBP9.3□□□□□ -0.92
CLCN6-202ENST00000346436 SURF2Q15527 256 aaPredicted RBP9.3□□□□□ -0.92
CLCN6-202ENST00000346436 SLC25A47Q6Q0C1 308 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 PHOX2AO14813 284 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 HPRT1P00492 218 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 MDKP21741 143 aaPredicted RBP9.3□□□□□ -0.92
CLCN6-202ENST00000346436 FDX2Q6P4F2 183 aa9.3□□□□□ -0.92
CLCN6-202ENST00000346436 NPIPB11E5RHQ5 1161 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 J3QR06 171 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 MBPP02686 304 aaPredicted RBP9.29□□□□□ -0.92
CLCN6-202ENST00000346436 H3F3AP84243 136 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 ZNF705AQ6ZN79 300 aaPredicted RBP9.29□□□□□ -0.92
CLCN6-202ENST00000346436 C16orf82Q7Z2V1 217 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 Q9N2K0 584 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 DOK5Q9P104 306 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 HIGD1AQ9Y241 93 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 RNF222A6NCQ9 220 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 RPL36A-HNRNPH2H7BZ11 118 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 TRGV3P03979 118 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 PLA2G5P39877 138 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 RPL13AP40429 203 aaKnown RBP9.29□□□□□ -0.92
CLCN6-202ENST00000346436 LY6G6FQ5SQ64 297 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 VWA1Q6PCB0 445 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 FA2HQ7L5A8 372 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 ZIC4Q8N9L1 334 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 UFC1Q9Y3C8 167 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 RNF212Q495C1 297 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 ZNF738Q8NE65 137 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 OR4P4Q8NGL7 312 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 CDC42EP3Q9UKI2 254 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 DNAJC13O75165 2243 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 ZNF708P17019 499 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 FCER1GP30273 86 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 TIMP3P35625 211 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 P2RY1P47900 373 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 SRSF3P84103 164 aaKnown RBP9.29□□□□□ -0.92
CLCN6-202ENST00000346436 MEF2CQ06413 473 aaPredicted RBP9.29□□□□□ -0.92
CLCN6-202ENST00000346436 TMEM37Q8WXS4 190 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 A0A1B0GU03 582 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 TMEM14DPA8MWL7 114 aa9.29□□□□□ -0.92
CLCN6-202ENST00000346436 MYOD1P15172 320 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms