RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 HLA-GP17693 338 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 OR4C13Q8NGP0 309 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 MMP24Q9Y5R2 645 aa13.93□□□□□ -0.18
SMARCA4-201ENST00000344626 IGHV1-18A0A0C4DH31 117 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 PIN1P1O15428 100 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 SPCS3P61009 180 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 MIDNQ504T8 468 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 IGFL3Q6UXB1 125 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 TVP23CQ96ET8 276 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 RHOVQ96L33 236 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 ALX4Q9H161 411 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 MBD3L4A6NDZ8 208 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 MBD3L3A6NE82 208 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 MBD3L5A6NJ08 208 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 DBX1A6NMT0 343 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 USF1P22415 310 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 UBE2L3P68036 154 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 MBD3L2Q8NHZ7 208 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 JMJD8Q96S16 334 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 FBXL17Q9UF56 701 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 TMEM14DPA8MWL7 114 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 PPP5D1E7EU14 171 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 TRIM77I1YAP6 450 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 ARTNQ5T4W7 220 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 FAM216BQ8N7L0 139 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 ADAD2Q8NCV1 583 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 SLC24A4Q8NFF2 622 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 TEPPQ6URK8 271 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 RELL2Q8NC24 303 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 LEAP2Q969E1 77 aa13.92□□□□□ -0.18
SMARCA4-201ENST00000344626 A0A1W2PS18 150 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 MOGAT2Q3SYC2 334 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 RPRMLQ8N4K4 120 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 OR4X1Q8NH49 305 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 ALX3O95076 343 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 USF2Q15853 346 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 C10orf113Q5VZT2 155 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 HMSDA8MTL9 139 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 LYPD3O95274 346 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 GUCA2BQ16661 112 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 PRR13Q9NZ81 148 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 DPM3Q9P2X0 92 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 RCC1P18754 421 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 RABAC1Q9UI14 185 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 NLRC5Q86WI3 1866 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 GALR1P47211 349 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 GAB2Q9UQC2 676 aa13.91□□□□□ -0.18
SMARCA4-201ENST00000344626 COL8A1P27658 744 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 EXOSC2Q13868 293 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 VSIG4Q9Y279 399 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 HLA-DQB1P01920 261 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 EFNA4P52798 201 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 WFDC3Q8IUB2 231 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 WDR81Q562E7 1941 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 WDR87Q6ZQQ6 2873 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 EFNA2O43921 213 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 SSX7Q7RTT5 188 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 PPP1R2P9O14990 202 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 OR2A4O95047 310 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 OR4A5Q8NH83 315 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 OR2A7Q96R45 310 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 TMEM222Q9H0R3 208 aa13.9□□□□□ -0.18
SMARCA4-201ENST00000344626 HIVEP3Q5T1R4 2406 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 FAM162BQ5T6X4 162 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 NXF2Q9GZY0 626 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 SLC25A17O43808 307 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 PGLYRP1O75594 196 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 PAX5Q02548 391 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 ZNF273Q14593 569 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 ZIC4Q8N9L1 334 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 GAS1P54826 345 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 K7EM74 188 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 PPOXP50336 477 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 ERVFC1-1P60608 527 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 FAM106AQ4KMX7 169 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 Q71RC1 249 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 HSD17B13Q7Z5P4 300 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 ZNF680Q8NEM1 530 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 OR4C12Q96R67 309 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 TLNRD1Q9H1K6 362 aa13.89□□□□□ -0.19
SMARCA4-201ENST00000344626 MMP9P14780 707 aa13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 CXorf66Q5JRM2 361 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 RBPMS2Q6ZRY4 209 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 C16orf82Q7Z2V1 217 aa13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 PHYHIPLQ96FC7 376 aa13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 IGHV3-21A0A0B4J1V1 117 aa13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 HIST1H1EP10412 219 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 LINC00312Q9Y6C7 94 aa13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 ANKRD11Q6UB99 2663 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 FAM78BQ5VT40 261 aa13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 WBP1Q96G27 269 aa13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 CLCF1Q9UBD9 225 aa13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 HIGD1AQ9Y241 93 aa13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 ZNF672Q499Z4 452 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 CABLES2Q9BTV7 478 aa13.88□□□□□ -0.19
SMARCA4-201ENST00000344626 TRAV30A0A087WSZ9 112 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 H0YL77 283 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 ZNF737O75373 536 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 OR2C1O95371 312 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 ZNRF4Q8WWF5 429 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms