RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 FOXL2NBQ6ZUU3 175 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 STARD4Q96DR4 205 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 C5orf49A4QMS7 147 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 VENTXO95231 258 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 AMTP48728 403 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 COMPP49747 757 aaPredicted RBP12.54□□□□□ -0.4
CLCN1-201ENST00000343257 HNRNPA3P51991 378 aaKnown RBP12.54□□□□□ -0.4
CLCN1-201ENST00000343257 RNPS1Q15287 305 aaKnown RBP12.54□□□□□ -0.4
CLCN1-201ENST00000343257 PRR31Q5SQ13 230 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 FAM19A2Q8N3H0 131 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 OR5A2Q8NGI9 324 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 OR10G8Q8NGN5 311 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 REPIN1Q9BWE0 567 aaKnown RBP12.54□□□□□ -0.4
CLCN1-201ENST00000343257 DEPPQ9NTK1 212 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 TRAPPC2LQ9UL33 140 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 WIPI2Q9Y4P8 454 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 TRAV24A0A0B4J272 114 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 A0A1W2PPV4 95 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 LMO7DNF2Z398 122 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 ZIC3O60481 467 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 CRYABP02511 175 aaKnown RBP12.54□□□□□ -0.4
CLCN1-201ENST00000343257 NTF3P20783 257 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 TCL1AP56279 114 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 ASPHD1Q5U4P2 390 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 FBXO46Q6PJ61 603 aaPredicted RBP12.54□□□□□ -0.4
CLCN1-201ENST00000343257 TMEM147Q9BVK8 224 aa12.54□□□□□ -0.4
CLCN1-201ENST00000343257 TBL2Q9Y4P3 447 aaKnown RBP12.54□□□□□ -0.4
CLCN1-201ENST00000343257 RHBDL1O75783 438 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 NGFP01138 241 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 UBE2NP61088 152 aaKnown RBP12.53□□□□□ -0.4
CLCN1-201ENST00000343257 RBX1P62877 108 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 TMEM14EPQ6UXP3 125 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 MRPL21Q7Z2W9 205 aaKnown RBP12.53□□□□□ -0.4
CLCN1-201ENST00000343257 FADS6Q8N9I5 356 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 IFI44Q8TCB0 444 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 APH1AQ96BI3 265 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 LRFN3Q9BTN0 628 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 UBE2ZQ9H832 354 aaPredicted RBP12.53□□□□□ -0.4
CLCN1-201ENST00000343257 LOC102724200A0A096LPH7 203 aaPredicted RBP12.53□□□□□ -0.4
CLCN1-201ENST00000343257 PAFAH1B2P68402 229 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 C22orf15Q8WYQ4 148 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 APOBEC3DQ96AK3 386 aaPredicted RBP12.53□□□□□ -0.4
CLCN1-201ENST00000343257 EXPH5Q8NEV8 1989 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 IGLV3-32A0A0A0MS00 114 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 VAMP5O95183 116 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 TDGF1P13385 188 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 CA6P23280 308 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 RANP62826 216 aaKnown RBP12.53□□□□□ -0.4
CLCN1-201ENST00000343257 LSM10Q969L4 123 aaKnown RBP12.53□□□□□ -0.4
CLCN1-201ENST00000343257 TECTBQ96PL2 329 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 CFHR5Q9BXR6 569 aa12.53□□□□□ -0.4
CLCN1-201ENST00000343257 HYAL1Q12794 435 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 LEMD1Q68G75 181 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 DRAM1Q8N682 238 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 ST6GALNAC3Q8NDV1 305 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 CCDC74BQ96LY2 380 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 UHRF2Q96PU4 802 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 GNB4Q9HAV0 340 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 HOXA4Q00056 320 aaPredicted RBP12.52□□□□□ -0.41
CLCN1-201ENST00000343257 LCN12Q6JVE5 192 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 VASH2Q86V25 355 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 OR8I2Q8N0Y5 310 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 ABHD3Q8WU67 409 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 PLPPR2Q96GM1 343 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 DLL3Q9NYJ7 618 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 TP73-AS1Q9UF72 201 aa12.52□□□□□ -0.41
CLCN1-201ENST00000343257 FOXL1Q12952 345 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 SAXO1Q8IYX7 474 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 RCHY1Q96PM5 261 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 ZNF586Q9NXT0 402 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 LAMTOR2Q9Y2Q5 125 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 GTF3C1Q12789 2109 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 ODAMA1E959 279 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 CBY3A6NI87 242 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 DEGS1O15121 323 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 FOXG1P55316 489 aaPredicted RBP12.51□□□□□ -0.41
CLCN1-201ENST00000343257 ACSF3Q4G176 576 aaPredicted RBP12.51□□□□□ -0.41
CLCN1-201ENST00000343257 SPATA46Q5T0L3 261 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 NRN1Q9NPD7 142 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 NAT8BQ9UHF3 227 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 HYPMO75409 117 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 S1PR2O95136 353 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 CLDN14O95500 239 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 ARL14EPLP0DKL9 152 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 PSG7Q13046 419 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 RNF138Q8WVD3 245 aa12.51□□□□□ -0.41
CLCN1-201ENST00000343257 LIN7CQ9NUP9 197 aaKnown RBP12.51□□□□□ -0.41
CLCN1-201ENST00000343257 A0A0G2JMM0 328 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 A0A1W2PPB8 328 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 A0A1W2PRS3 328 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 KIR3DP1A8MWS1 328 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 OTX2P32243 289 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 TIMP3P35625 211 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 RPL30P62888 115 aaKnown RBP12.5□□□□□ -0.41
CLCN1-201ENST00000343257 HTD2P86397 168 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 Q6ZS49 121 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 TSTD1Q8NFU3 115 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 CHRNA10Q9GZZ6 450 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 TIMM9Q9Y5J7 89 aa12.5□□□□□ -0.41
CLCN1-201ENST00000343257 M0QZ24 198 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms