RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 ZNF808Q8N4W9 903 aaPredicted RBP11.01□□□□□ -0.65
COL18A1-201ENST00000342220 OR8G5Q8NG78 346 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 MRGPRDQ8TDS7 321 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 SPSB4Q96A44 273 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 SNX22Q96L94 193 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 NAA60Q9H7X0 242 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 LYNX1G3V0Z9 82 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 LY6HO94772 140 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 SCAF4O95104 1147 aaKnown RBP11□□□□□ -0.65
COL18A1-201ENST00000342220 PLAUP00749 431 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 LYNX1P0DP58 116 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 RNF151Q2KHN1 245 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 MIDNQ504T8 468 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 TMEM42Q69YG0 159 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 ZNRF1Q8ND25 227 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 METRNQ9UJH8 293 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 CRYBG3Q68DQ2 2970 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 TGIF2-C20orf24A0A0A6YYL0 155 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 OR2H2O95918 312 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 CDSNQ15517 529 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 OR52M1Q8NGK5 317 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 RNASE8Q8TDE3 154 aaKnown RBP11□□□□□ -0.65
COL18A1-201ENST00000342220 PLK3Q9H4B4 646 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 ARFGEF3Q5TH69 2177 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 OR5B21A6NL26 309 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 J3QT63 122 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 SIAH2O43255 324 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 C1QL1O75973 258 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 OR4A8P0C604 315 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 CCKARP32238 428 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 JOSD1Q15040 202 aaPredicted RBP11□□□□□ -0.65
COL18A1-201ENST00000342220 Q8WTZ3 238 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 DIRC2Q96SL1 478 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 PLEKHA2Q9HB19 425 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 POLDIP2Q9Y2S7 368 aa11□□□□□ -0.65
COL18A1-201ENST00000342220 E5RGE8 158 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 EPHA1P21709 976 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 OR3A1P47881 315 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 TNFAIP6P98066 277 aaPredicted RBP10.99□□□□□ -0.65
COL18A1-201ENST00000342220 SLC25A31Q9H0C2 315 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 SH3BGRL3Q9H299 93 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 SLC2A9Q9NRM0 540 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 PPP1R3CQ9UQK1 317 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 NSG2Q9Y328 171 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 FGF12P61328 243 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 ZNF705AQ6ZN79 300 aaPredicted RBP10.99□□□□□ -0.65
COL18A1-201ENST00000342220 C20orf204Q6ZNR8 217 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 HSF4Q9ULV5 492 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 UTP20O75691 2785 aaKnown RBP10.99□□□□□ -0.65
COL18A1-201ENST00000342220 DPRXA6NFQ7 191 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 TK1P04183 234 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 ASCL1P50553 236 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 GAGE1Q13065 139 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 HNF4GQ14541 408 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 C16orf54Q6UWD8 224 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 LYPD6BQ8NI32 183 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 FRZBQ92765 325 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 ELOVL1Q9BW60 279 aa10.99□□□□□ -0.65
COL18A1-201ENST00000342220 METTL15P1P0C7V9 234 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 DTYMKP23919 212 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 SNCAP37840 140 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 YLPM1P49750 1951 aaKnown RBP10.98□□□□□ -0.65
COL18A1-201ENST00000342220 FBXW12Q6X9E4 464 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 OR51I2Q9H344 312 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 SH2D1BO14796 132 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 PHF1O43189 567 aaPredicted RBP10.98□□□□□ -0.65
COL18A1-201ENST00000342220 HAND1O96004 215 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 AADACP22760 399 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 GNRHRP30968 328 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 RBX1P62877 108 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 Q6ZPA2 131 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 LIAT1Q6ZQX7 453 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 HSD17B11Q8NBQ5 300 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 LEAP2Q969E1 77 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 PARD6GQ9BYG4 376 aaPredicted RBP10.98□□□□□ -0.65
COL18A1-201ENST00000342220 ERRFI1Q9UJM3 462 aaPredicted RBP10.98□□□□□ -0.65
COL18A1-201ENST00000342220 POMT1Q9Y6A1 747 aa10.98□□□□□ -0.65
COL18A1-201ENST00000342220 GNLYP22749 145 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 CEACAM8P31997 349 aaPredicted RBP10.97□□□□□ -0.65
COL18A1-201ENST00000342220 TAGLN2P37802 199 aaKnown RBP10.97□□□□□ -0.65
COL18A1-201ENST00000342220 CAMLGP49069 296 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 OR5I1Q13606 314 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 BTNL3Q6UXE8 466 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 MSI2Q96DH6 328 aaKnown RBP10.97□□□□□ -0.65
COL18A1-201ENST00000342220 ARV1Q9H2C2 271 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 GPR137BO60478 399 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 RBMXL2O75526 392 aaKnown RBP10.97□□□□□ -0.65
COL18A1-201ENST00000342220 TUSC2O75896 110 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 DANCRP0C864 163 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 IRF2P14316 349 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 TLE1Q04724 770 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 GUSBP1Q15486 140 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 C18orf12Q96KH6 178 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 CXXC4Q9H2H0 198 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 OR1A1Q9P1Q5 309 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 UBE2J1Q9Y385 318 aaPredicted RBP10.97□□□□□ -0.65
COL18A1-201ENST00000342220 TRAV24A0A0B4J272 114 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 PSPNO60542 156 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 PRH1P02810 166 aa10.97□□□□□ -0.65
COL18A1-201ENST00000342220 MDKP21741 143 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms