RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 ZNF726P1Q15940 193 aa8.9□□□□□ -0.99
TRAF3IP2-201ENST00000340026 POU2AF1Q16633 256 aa8.9□□□□□ -0.99
TRAF3IP2-201ENST00000340026 Q3ZCU0 254 aa8.9□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SLC25A24Q6NUK1 477 aa8.9□□□□□ -0.99
TRAF3IP2-201ENST00000340026 LRP11Q86VZ4 500 aa8.9□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CLCC1Q96S66 551 aa8.9□□□□□ -0.99
TRAF3IP2-201ENST00000340026 IFI27L2Q9H2X8 130 aa8.9□□□□□ -0.99
TRAF3IP2-201ENST00000340026 FZR1Q9UM11 496 aa8.9□□□□□ -0.99
TRAF3IP2-201ENST00000340026 KIAA2026Q5HYC2 2103 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TRGV8A0A0C4DH27 118 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZG16O60844 167 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 KRASP01116 189 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CD40P25942 277 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 GPR12P47775 334 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RAB5BP61020 215 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SPANXN5Q5MJ07 72 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 FAM180AQ6UWF9 173 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 UBALD1Q8TB05 177 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RCC1LQ96I51 464 aaKnown RBP8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ADTRPQ96IZ2 230 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RFNGQ9Y644 331 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNF292O60281 2723 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 MPDU1O75352 247 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 NXPH3O95157 252 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 IFNA1P01562 189 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TNFSF4P23510 183 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SPCS3P61009 180 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RPP30P78346 268 aaKnown RBP8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 C17orf58Q2M2W7 97 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 OR10P1Q8NGE3 313 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TVP23CQ96ET8 276 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RSG1Q9BU20 258 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 GFOD1Q9NXC2 390 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CALYQ9NYX4 217 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 PSG11Q9UQ72 335 aa8.89□□□□□ -0.99
TRAF3IP2-201ENST00000340026 KBTBD11-OT1A0A1B0GTJ5 212 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNF816Q0VGE8 651 aaPredicted RBP8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNF787Q6DD87 383 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNF788Q6ZQV5 615 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RAB1CQ92928 201 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 R3HDM4Q96D70 268 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 GCM1Q9NP62 436 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CLN8Q9UBY8 286 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 DUSP13Q9UII6 198 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 VAX2Q9UIW0 290 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 PRELID1Q9Y255 219 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 USF3Q68DE3 2245 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 IGHV3-64DA0A0J9YX35 117 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNF729A6NN14 1252 aaPredicted RBP8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 H3BQ15 152 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ST8SIA5O15466 376 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SNRNP70P08621 437 aaKnown RBP8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 HABP2Q14520 560 aaPredicted RBP8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 MOGAT3Q86VF5 341 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 LINC00518Q8N0U6 118 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNF808Q8N4W9 903 aaPredicted RBP8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNF439Q8NDP4 499 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CA5BP1Q8WTZ4 195 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ITLN1Q8WWA0 313 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 NIPSNAP3BQ9BS92 247 aa8.88□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZFHX4Q86UP3 3567 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SPENQ96T58 3664 aaKnown RBP8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CTXND1A0A1B0GTU2 59 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 FNDC10F2Z333 226 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 M0R036 132 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 KLK10O43240 276 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 IGHV1-46P01743 117 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 OR13C7P0DN81 318 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 NQO2P16083 231 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CCKARP32238 428 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 FAM90A2PQ658T7 463 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 NCR3LG1Q68D85 454 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TMEM108Q6UXF1 575 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RBMS3Q6XE24 437 aaKnown RBP8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RPRMLQ8N4K4 120 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TANC2Q9HCD6 1990 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 HEATR1Q9H583 2144 aaKnown RBP8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 C1orf196B1AJZ1 125 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 IL6RP08887 468 aaPredicted RBP8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RAB5AP20339 215 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 THBS3P49746 956 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ATP5IP56385 69 aaPredicted RBP8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNF665Q9H7R5 613 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 GNG12Q9UBI6 72 aa8.87□□□□□ -0.99
TRAF3IP2-201ENST00000340026 C15orf62A8K5M9 175 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SEC14L6B5MCN3 397 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 C17orf112F2Z3M2 114 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TMEM250H0YL14 139 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 PRRG2O14669 202 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 VDAC2P45880 294 aaPredicted RBP8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TNFAIP6P98066 277 aaPredicted RBP8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ETV3LQ6ZN32 361 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 DOLPP1Q86YN1 238 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RPP25LQ8N5L8 163 aaKnown RBP8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CYB561D1Q8N8Q1 229 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 OR4S2Q8NH73 311 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RAB39BQ96DA2 213 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 GAFA1Q96PS6 74 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 MANBALQ9NQG1 85 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 WDR83OSQ9Y284 106 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms