RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 DOCK6Q96HP0 2047 aa13.83□□□□□ -0.19
NPHP3-201ENST00000337331 A0A1B0GUS0 222 aa13.83□□□□□ -0.2
NPHP3-201ENST00000337331 J3QT63 122 aa13.83□□□□□ -0.2
NPHP3-201ENST00000337331 SPEM2Q0P670 501 aa13.83□□□□□ -0.2
NPHP3-201ENST00000337331 MOB3BQ86TA1 216 aa13.83□□□□□ -0.2
NPHP3-201ENST00000337331 SBF1O95248 1867 aa13.83□□□□□ -0.2
NPHP3-201ENST00000337331 ZNF207O43670 478 aaKnown RBP13.83□□□□□ -0.2
NPHP3-201ENST00000337331 TMEM50BP56557 158 aa13.83□□□□□ -0.2
NPHP3-201ENST00000337331 OR1K1Q8NGR3 316 aa13.83□□□□□ -0.2
NPHP3-201ENST00000337331 ANK1P16157 1881 aa13.83□□□□□ -0.2
NPHP3-201ENST00000337331 ARHGEF17Q96PE2 2063 aaPredicted RBP13.83□□□□□ -0.2
NPHP3-201ENST00000337331 SERTM2A0A1B0GWG4 89 aa13.83□□□□□ -0.2
NPHP3-201ENST00000337331 OTX1P32242 354 aaPredicted RBP13.83□□□□□ -0.2
NPHP3-201ENST00000337331 UQCRFS1P47985 274 aa13.83□□□□□ -0.2
NPHP3-201ENST00000337331 TMEM56Q96MV1 263 aa13.83□□□□□ -0.2
NPHP3-201ENST00000337331 SCN5AQ14524 2016 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 A0A1W2PRS3 328 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 DNPH1O43598 174 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 SOX8P57073 446 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 VMA21Q3ZAQ7 101 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 TPTE2P1Q5T6R2 138 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 OR52L2PQ8NGH6 319 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 OR5A2Q8NGI9 324 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 CHRDL1Q9BU40 450 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 OR2W1Q9Y3N9 320 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 NUDT3O95989 172 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 OPRK1P41145 380 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 GNB2P62879 340 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 CYP2G1PQ6ZSU1 146 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 GSX1Q9H4S2 264 aaPredicted RBP13.82□□□□□ -0.2
NPHP3-201ENST00000337331 CLEC1BQ9P126 229 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 PRSS47A8MTI9 375 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 RHOBP62745 196 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 LRRC10Q5BKY1 277 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 HES3Q5TGS1 186 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 CCL17Q92583 94 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 LOXL4Q96JB6 756 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 ZNF488Q96MN9 340 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 DUSP15Q9H1R2 295 aaPredicted RBP13.82□□□□□ -0.2
NPHP3-201ENST00000337331 TBL2Q9Y4P3 447 aaKnown RBP13.82□□□□□ -0.2
NPHP3-201ENST00000337331 FREM3P0C091 2139 aa13.82□□□□□ -0.2
NPHP3-201ENST00000337331 RPL23P62829 140 aaKnown RBP13.81□□□□□ -0.2
NPHP3-201ENST00000337331 Q6ZVH6 145 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 OR1A1Q9P1Q5 309 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 A0A0U1RQV5 110 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 A0A1B0GV72 72 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 MS4A18H0YCH9 400 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 MRPS11P82912 194 aaKnown RBP13.81□□□□□ -0.2
NPHP3-201ENST00000337331 MS4A18Q3C1V0 323 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 LOC101059948A0A1B0GTJ6 334 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 ZNHIT1O43257 154 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 NPIPB7O75200 414 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 SNAI3Q3KNW1 292 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 CDCP2Q5VXM1 449 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 GFRALQ6UXV0 394 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 RTN4RL2Q86UN3 420 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 RCC1LQ96I51 464 aaKnown RBP13.81□□□□□ -0.2
NPHP3-201ENST00000337331 WDR54Q9H977 334 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 SLC45A2Q9UMX9 530 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 WDR90Q96KV7 1748 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 CREBBPQ92793 2442 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 IFNL4K9M1U5 179 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 TMEM187Q14656 261 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 RPEL1Q2QD12 228 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 WDYHV1Q96HA8 205 aa13.81□□□□□ -0.2
NPHP3-201ENST00000337331 SCN8AQ9UQD0 1980 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 TNFAIP6P98066 277 aaPredicted RBP13.8□□□□□ -0.2
NPHP3-201ENST00000337331 PSG4Q00888 419 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 SAMD13Q5VXD3 122 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 DEFB124Q8NES8 71 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 CXXC4Q9H2H0 198 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 HSPB7Q9UBY9 170 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 TMEM14DPA8MWL7 114 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 ISG15P05161 165 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 RBM11P57052 281 aaKnown RBP13.8□□□□□ -0.2
NPHP3-201ENST00000337331 EGR4Q05215 589 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 TRAT1Q6PIZ9 186 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 SLC25A45Q8N413 288 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 TMEM74BQ9NUR3 256 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 LHFPL6Q9Y693 200 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 RPL36A-HNRNPH2H7BZ11 118 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 HAND1O96004 215 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 PRRX1P54821 245 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 OR8G5Q8NG78 346 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 TMEM242Q9NWH2 141 aa13.8□□□□□ -0.2
NPHP3-201ENST00000337331 IFI6P09912 130 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 CAMPP49913 170 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 GNG4P50150 75 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 TMEM251Q8N6I4 163 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 ORAOV1Q8WV07 137 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 PSG2P11465 335 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 FCER1GP30273 86 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 FAM19A2Q8N3H0 131 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 SSMEM1Q8WWF3 244 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 F2RP25116 425 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 SELENOTP62341 195 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 IZUMO4Q1ZYL8 232 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 AICDAQ9GZX7 198 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 TECRQ9NZ01 308 aaKnown RBP13.79□□□□□ -0.2
NPHP3-201ENST00000337331 CLN8Q9UBY8 286 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms