RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 DHRS13Q6UX07 377 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 LINC00696Q6ZRV3 163 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 LHFPL1Q86WI0 220 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 ZNF721Q8TF20 911 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 SLC45A2Q9UMX9 530 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 COX7A2P2O60397 106 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 ZG16O60844 167 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 ARL14EPLP0DKL9 152 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 CD1BP29016 333 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 FGFRL1Q8N441 504 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 NUDT16L1Q9BRJ7 211 aaKnown RBP11.37□□□□□ -0.59
COL2A1-201ENST00000337299 POLR3KQ9Y2Y1 108 aaPredicted RBP11.37□□□□□ -0.59
COL2A1-201ENST00000337299 PATJQ8NI35 1801 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 IGHV1OR15-9A0A0B4J2B8 117 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 TNFSF13O75888 250 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 SELENOVP59797 346 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 LCN2P80188 198 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 OR8B8Q15620 311 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 PMCHL1Q16048 86 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 SLC25A34Q6PIV7 304 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 OR8A1Q8NGG7 326 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 SGK494Q96LW2 274 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 GAL3ST2Q9H3Q3 398 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 TANC1Q9C0D5 1861 aa11.37□□□□□ -0.59
COL2A1-201ENST00000337299 FOXA3P55318 350 aaPredicted RBP11.36□□□□□ -0.59
COL2A1-201ENST00000337299 IL19Q9UHD0 177 aa11.36□□□□□ -0.59
COL2A1-201ENST00000337299 TSPAN7P41732 249 aa11.36□□□□□ -0.59
COL2A1-201ENST00000337299 DCAF10Q5QP82 559 aa11.36□□□□□ -0.59
COL2A1-201ENST00000337299 MAP1LC3CQ9BXW4 147 aa11.36□□□□□ -0.59
COL2A1-201ENST00000337299 SH2D2AQ9NP31 389 aa11.36□□□□□ -0.59
COL2A1-201ENST00000337299 PRR31Q5SQ13 230 aa11.36□□□□□ -0.59
COL2A1-201ENST00000337299 SPSB3Q6PJ21 355 aa11.36□□□□□ -0.59
COL2A1-201ENST00000337299 TPRX1Q8N7U7 411 aa11.36□□□□□ -0.59
COL2A1-201ENST00000337299 FAM216AQ8WUB2 273 aa11.36□□□□□ -0.59
COL2A1-201ENST00000337299 PXMP4Q9Y6I8 212 aa11.36□□□□□ -0.59
COL2A1-201ENST00000337299 CXorf1O96002 111 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 SLC25A5P05141 298 aaKnown RBP11.35□□□□□ -0.59
COL2A1-201ENST00000337299 FKBP2P26885 142 aaKnown RBP11.35□□□□□ -0.59
COL2A1-201ENST00000337299 C12orf54Q6X4T0 127 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 DENND4AQ7Z401 1863 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 ISLRO14498 428 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 CRYBB3P26998 211 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 NUDT11Q96G61 164 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 RALGAPA2Q2PPJ7 1873 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 A0A0U1RQV5 110 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 RPL31P62899 125 aaKnown RBP11.35□□□□□ -0.59
COL2A1-201ENST00000337299 TFF3Q07654 80 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 FHL1Q13642 323 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 GUSBP11Q6P575 273 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 MTCL1Q9Y4B5 1905 aaKnown RBP11.35□□□□□ -0.59
COL2A1-201ENST00000337299 TSPAN2O60636 221 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 AESQ08117 197 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 MYO7BQ6PIF6 2116 aa11.35□□□□□ -0.59
COL2A1-201ENST00000337299 TMEM30CPA0ZSE6 113 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 SPEM2Q0P670 501 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 IBA57Q5T440 356 aaKnown RBP11.34□□□□□ -0.59
COL2A1-201ENST00000337299 LCN12Q6JVE5 192 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 TMEM56Q96MV1 263 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 PMCHL2Q9BQD1 86 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 TMEM140Q9NV12 185 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 B3GAT1Q9P2W7 334 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 SCO2A0A1W2PP80 73 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 C18orf12Q96KH6 178 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 HIF1ANQ9NWT6 349 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 TSC2P49815 1807 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 IGKV1D-13A0A0B4J2D9 117 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 CA2P00918 260 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 MT-ND6P03923 174 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 IGKV1-13P0DP09 117 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 NMUP48645 174 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 DCAF12Q5T6F0 453 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 FAM90A2PQ658T7 463 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 ZNF525Q8N782 197 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 CDX2Q99626 313 aaPredicted RBP11.34□□□□□ -0.59
COL2A1-201ENST00000337299 PSMG3Q9BT73 122 aaPredicted RBP11.34□□□□□ -0.59
COL2A1-201ENST00000337299 COMMD5Q9GZQ3 224 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 MEGF9Q9H1U4 602 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 ZNF581Q9P0T4 197 aa11.34□□□□□ -0.59
COL2A1-201ENST00000337299 A6NCN8 305 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 CDIPTO14735 213 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 LEPROTL1O95214 131 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 PLAURQ03405 335 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 ZP4Q12836 540 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 Q6ZVH6 145 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 ZNF430Q9H8G1 570 aaPredicted RBP11.33□□□□□ -0.6
COL2A1-201ENST00000337299 BOKQ9UMX3 212 aaPredicted RBP11.33□□□□□ -0.6
COL2A1-201ENST00000337299 COLQQ9Y215 455 aaPredicted RBP11.33□□□□□ -0.6
COL2A1-201ENST00000337299 ZFHX2Q9C0A1 2572 aaPredicted RBP11.33□□□□□ -0.6
COL2A1-201ENST00000337299 A0A1W2PRS3 328 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 A6NDN8 102 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 SYNGR1O43759 233 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 UMODP07911 640 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 LRRC75BQ2VPJ9 315 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 MAFAQ8NHW3 353 aaPredicted RBP11.33□□□□□ -0.6
COL2A1-201ENST00000337299 SMIM12Q96EX1 92 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 ABHD14BQ96IU4 210 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 NAA38Q9BRA0 125 aaKnown RBP11.33□□□□□ -0.6
COL2A1-201ENST00000337299 DUSP15Q9H1R2 295 aaPredicted RBP11.33□□□□□ -0.6
COL2A1-201ENST00000337299 FAM87AP0C7U9 286 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 CT45A6P0DMU7 189 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms