RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 WASF3Q9UPY6 502 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 TET2Q6N021 2002 aaPredicted RBP7.36□□□□□ -1.23
SNCA-201ENST00000336904 SMCO3A2RU48 225 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 CLDN14O95500 239 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 OR9G9P0C7N8 305 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 KITLGP21583 273 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 GPR12P47775 334 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 TNFRSF9Q07011 255 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 CLEC12BQ2HXU8 276 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 SOHLH1Q5JUK2 328 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 ZNF525Q8N782 197 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 LYPD6BQ8NI32 183 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 Q8TCH9 128 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 SCGB1C1Q8TD33 95 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 MEGF10Q96KG7 1140 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 ABCA1O95477 2261 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 DYSFO75923 2080 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 ZNF737O75373 536 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 IFNA17P01571 189 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 CEACAM1P13688 526 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 MDKP21741 143 aaPredicted RBP7.35□□□□□ -1.23
SNCA-201ENST00000336904 RAB11AP62491 216 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 SLC38A11Q08AI6 406 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 Q6ZS92 163 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 H2BFWTQ7Z2G1 175 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 FAM90A1Q86YD7 464 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 RND1Q92730 232 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 FAM122AQ96E09 287 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 A0A0G2JNJ9 132 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 MARCH11A6NNE9 402 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 COLCA2A8K830 154 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 PRSS44E7EML9 344 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 CEACAM4O75871 244 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 TAS2R30P59541 319 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 P2RY6Q15077 328 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 ZNF674Q2M3X9 581 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 SLC35E4Q6ICL7 350 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 OR5T1Q8NG75 326 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 TMEM204Q9BSN7 226 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 SLC35B3Q9H1N7 401 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 Q9UFV3 132 aa7.35□□□□□ -1.23
SNCA-201ENST00000336904 HRNRQ86YZ3 2850 aaPredicted RBP7.34□□□□□ -1.23
SNCA-201ENST00000336904 C15orf65H3BRN8 121 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 SPINT2O43291 252 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 REG1BP48304 166 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 BAXQ07812 192 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 KIAA0141Q14154 515 aaPredicted RBP7.34□□□□□ -1.23
SNCA-201ENST00000336904 ICAM4Q14773 271 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 FAM122CQ6P4D5 195 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 SDSLQ96GA7 329 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 AGMATQ9BSE5 352 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 SCNM1Q9BWG6 230 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 RYDENQ9NUL5 291 aaKnown RBP7.34□□□□□ -1.23
SNCA-201ENST00000336904 AURKAIP1Q9NWT8 199 aaPredicted RBP7.34□□□□□ -1.23
SNCA-201ENST00000336904 KPTNQ9Y664 436 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 SRRM5B3KS81 715 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 TMPRSS2O15393 492 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 CTRB1P17538 263 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 LMO1P25800 156 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 SNRPEP62304 92 aaKnown RBP7.34□□□□□ -1.23
SNCA-201ENST00000336904 TNFAIP6P98066 277 aaPredicted RBP7.34□□□□□ -1.23
SNCA-201ENST00000336904 MBNL2Q5VZF2 373 aaKnown RBP7.34□□□□□ -1.23
SNCA-201ENST00000336904 ZNF787Q6DD87 383 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 CTRB2Q6GPI1 263 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 DOLPP1Q86YN1 238 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 DTD1Q8TEA8 209 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 HIST1H2BAQ96A08 127 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 R3HDM4Q96D70 268 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 RCC1LQ96I51 464 aaKnown RBP7.34□□□□□ -1.23
SNCA-201ENST00000336904 RAB40CQ96S21 281 aa7.34□□□□□ -1.23
SNCA-201ENST00000336904 STRAPQ9Y3F4 350 aaKnown RBP7.34□□□□□ -1.23
SNCA-201ENST00000336904 CELSR1Q9NYQ6 3014 aa7.34□□□□□ -1.24
SNCA-201ENST00000336904 ARHGAP32A7KAX9 2087 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 LRRC30A6NM36 301 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 H3BQ15 152 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 IGHV1-46P01743 117 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 NDUFB7P17568 137 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 PRAMEF5Q5TYX0 476 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 ACSM6Q6P461 480 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 LYG1Q8N1E2 194 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 C1orf162Q8NEQ5 155 aaPredicted RBP7.33□□□□□ -1.24
SNCA-201ENST00000336904 IL22RA2Q969J5 263 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 RAB39BQ96DA2 213 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 GCM1Q9NP62 436 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 ANKHD1Q8IWZ3 2542 aaKnown RBP7.33□□□□□ -1.24
SNCA-201ENST00000336904 NPIPB11E5RHQ5 1161 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 SCAF4O95104 1147 aaKnown RBP7.33□□□□□ -1.24
SNCA-201ENST00000336904 MORN2Q502X0 79 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 AVPI1Q5T686 147 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 GFRALQ6UXV0 394 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 ABHD12Q8N2K0 398 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 LRFN3Q9BTN0 628 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 PBDC1Q9BVG4 233 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 NAV3Q8IVL0 2385 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 DUXBA0A1W2PPF3 345 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 A8MXE2 369 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 NUDT19A8MXV4 375 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 LYNX1G3V0Z9 82 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 J3QW42 95 aa7.33□□□□□ -1.24
SNCA-201ENST00000336904 SRP19P09132 144 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms