RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 OR8B12Q8NGG6 310 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 SOSTQ9BQB4 213 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 SPANXDQ9BXN6 97 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 RAB1BQ9H0U4 201 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 TLNRD1Q9H1K6 362 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 TMEM160Q9NX00 188 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 A0A1W2PS18 150 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 TSPAN2O60636 221 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 SRD5A2P31213 254 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 TNFAIP6P98066 277 aaPredicted RBP5.4□□□□□ -1.55
CSMD1-201ENST00000335551 NHLRC3Q5JS37 347 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.4□□□□□ -1.55
CSMD1-201ENST00000335551 TP53I13Q8NBR0 393 aaPredicted RBP5.4□□□□□ -1.55
CSMD1-201ENST00000335551 GPR82Q96P67 336 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 GLRX2Q9NS18 164 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 CYSLTR1Q9Y271 337 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 COX11Q9Y6N1 276 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 CXorf51AA0A1B0GTR3 108 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 MKRN2OSH3BPM6 223 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 CFDP00746 253 aaPredicted RBP5.4□□□□□ -1.55
CSMD1-201ENST00000335551 CTLA4P16410 223 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 TSPOP30536 169 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 GPR183P32249 361 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 GPR35Q9HC97 309 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 ASB1Q9Y576 335 aa5.4□□□□□ -1.55
CSMD1-201ENST00000335551 RBMY1BA6NDE4 496 aaKnown RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 RBMY1EA6NEQ0 496 aaKnown RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 CEACAM18A8MTB9 384 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 PLA2G10O15496 165 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 RBMY1DP0C7P1 496 aaKnown RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 RBMY1A1P0DJD3 496 aaKnown RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 RBMY1CP0DJD4 496 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 WNT5AP41221 380 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 NUBP1P53384 320 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 FOXC2Q99958 501 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 SLC25A2Q9BXI2 301 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 CCL26Q9Y258 94 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 CARHSP1Q9Y2V2 147 aaKnown RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 PLPP3O14495 311 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 S100A7L2Q5SY68 101 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 NR2C2APQ86WQ0 139 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 YAE1D1Q9NRH1 226 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 PRR13Q9NZ81 148 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 LAMTOR2Q9Y2Q5 125 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 SIPA1L1O43166 1804 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 IGHV3-43A0A0B4J1X8 118 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 WNT9BO14905 357 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 HPRT1P00492 218 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 IGHV3-43DP0DP04 118 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 ANOS1P23352 680 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 CBLN1P23435 193 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 MBNL2Q5VZF2 373 aaKnown RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 ZNF562Q6V9R5 426 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 BIVMQ86UB2 503 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 MRPL32Q9BYC8 188 aaKnown RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 H0YL77 283 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 PPIHO43447 177 aaKnown RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 MPZL1O95297 269 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 ETHE1O95571 254 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 HOXC4P09017 264 aaPredicted RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 PRR35P0CG20 571 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 GABRG2P18507 467 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 WNT10AQ9GZT5 417 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 PRDM13Q9H4Q3 707 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 RABAC1Q9UI14 185 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 SERTM1A2A2V5 107 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 K7ESM1 405 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 K7N7A8 449 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 F11P03951 625 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 GZMHP20718 246 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 TM4SF4P48230 202 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 IRF3Q14653 427 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 ACER2Q5QJU3 275 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 MRPL43Q8N983 215 aaKnown RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 PSG2P11465 335 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 MDKP21741 143 aaPredicted RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 ANKRD33Q7Z3H0 272 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 DEFB127Q9H1M4 99 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 NPVFQ9HCQ7 196 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 TRAV8-6A0A0B4J262 113 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 TRBV5-4A0A0C4DH59 114 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 J3KRW8 73 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 J3QR06 171 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 RRHO14718 337 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 CXCL13O43927 109 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 ZNF79Q15937 498 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 C14orf144Q96I85 54 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 SFXN3Q9BWM7 321 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 PLXNA2O75051 1894 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 TRAV21A0A0B4J279 112 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 FFAR1O14842 300 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 MFAP4P55083 255 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 LSM6P62312 80 aaKnown RBP5.39□□□□□ -1.55
CSMD1-201ENST00000335551 NKG7Q16617 165 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 MDP1Q86V88 176 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 POC1AQ8NBT0 407 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 LOC105371267A0A1B0GV96 52 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 ZGLP1P0C6A0 271 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 Q6AWC8 147 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 ST20Q9HBF5 79 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms