RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 TNFSF4P23510 183 aa15.39■□□□□ 0.06
PKP3-201ENST00000331563 SUMO1P63165 101 aaKnown RBP15.39■□□□□ 0.06
PKP3-201ENST00000331563 MCEMP1Q8IX19 187 aa15.39■□□□□ 0.06
PKP3-201ENST00000331563 ZNF430Q9H8G1 570 aaPredicted RBP15.39■□□□□ 0.06
PKP3-201ENST00000331563 BET1LQ9NYM9 111 aa15.39■□□□□ 0.06
PKP3-201ENST00000331563 IL19Q9UHD0 177 aa15.39■□□□□ 0.06
PKP3-201ENST00000331563 ZNF816-ZNF321PA0A0X1KG74 233 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 C11orf94C9JXX5 98 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 NBEAP1P0C6P0 100 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 CRISP2P16562 243 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 HINT1P49773 126 aaPredicted RBP15.39■□□□□ 0.05
PKP3-201ENST00000331563 IGLV3-12A0A075B6K2 115 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 IGHV3-15A0A0B4J1V0 119 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 TRAV34A0A0B4J273 112 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 CTXND1A0A1B0GTU2 59 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 IGLC2P0DOY2 106 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 IGLC3P0DOY3 106 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 ZNF468Q5VIY5 522 aaPredicted RBP15.39■□□□□ 0.05
PKP3-201ENST00000331563 ACSM6Q6P461 480 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 CLUHP3Q96NS8 147 aa15.39■□□□□ 0.05
PKP3-201ENST00000331563 C1QTNF9P0C862 333 aa15.38■□□□□ 0.05
PKP3-201ENST00000331563 VAMP3Q15836 100 aa15.38■□□□□ 0.05
PKP3-201ENST00000331563 ZDHHC23Q8IYP9 409 aa15.38■□□□□ 0.05
PKP3-201ENST00000331563 OR10G3Q8NGC4 313 aa15.38■□□□□ 0.05
PKP3-201ENST00000331563 OR56B2PQ8NGI1 322 aa15.38■□□□□ 0.05
PKP3-201ENST00000331563 ARRDC1-AS1Q9H2J1 176 aa15.38■□□□□ 0.05
PKP3-201ENST00000331563 BOD1L1Q8NFC6 3051 aa15.38■□□□□ 0.05
PKP3-201ENST00000331563 PGPEP1LA6NFU8 196 aa15.38■□□□□ 0.05
PKP3-201ENST00000331563 CBLN1P23435 193 aa15.38■□□□□ 0.05
PKP3-201ENST00000331563 ZNF611Q8N823 705 aa15.38■□□□□ 0.05
PKP3-201ENST00000331563 CLDN1O95832 211 aa15.37■□□□□ 0.05
PKP3-201ENST00000331563 OTX1P32242 354 aaPredicted RBP15.37■□□□□ 0.05
PKP3-201ENST00000331563 FUT6P51993 359 aa15.37■□□□□ 0.05
PKP3-201ENST00000331563 C1orf174Q8IYL3 243 aa15.37■□□□□ 0.05
PKP3-201ENST00000331563 FAM186AA6NE01 2351 aa15.37■□□□□ 0.05
PKP3-201ENST00000331563 KIAA1324LA8MWY0 1029 aaPredicted RBP15.37■□□□□ 0.05
PKP3-201ENST00000331563 DHHO43323 396 aa15.37■□□□□ 0.05
PKP3-201ENST00000331563 DEFA4P12838 97 aa15.37■□□□□ 0.05
PKP3-201ENST00000331563 RPS20P60866 119 aaKnown RBP15.37■□□□□ 0.05
PKP3-201ENST00000331563 FFAR4Q5NUL3 377 aa15.37■□□□□ 0.05
PKP3-201ENST00000331563 PRAMEF20Q5VT98 475 aa15.37■□□□□ 0.05
PKP3-201ENST00000331563 ASCL4Q6XD76 172 aa15.37■□□□□ 0.05
PKP3-201ENST00000331563 SIGLECL1Q8N7X8 197 aa15.37■□□□□ 0.05
PKP3-201ENST00000331563 NPIPA2E9PIF3 369 aa15.36■□□□□ 0.05
PKP3-201ENST00000331563 NPIPA3F8WFD2 350 aa15.36■□□□□ 0.05
PKP3-201ENST00000331563 KITLGP21583 273 aa15.36■□□□□ 0.05
PKP3-201ENST00000331563 BCL2L2Q92843 193 aaPredicted RBP15.36■□□□□ 0.05
PKP3-201ENST00000331563 ULBP2Q9BZM5 246 aa15.36■□□□□ 0.05
PKP3-201ENST00000331563 ELOVL5Q9NYP7 299 aa15.36■□□□□ 0.05
PKP3-201ENST00000331563 MDFIC2A0A1B0GVS7 189 aa15.36■□□□□ 0.05
PKP3-201ENST00000331563 AQP7P3A6NL99 342 aa15.36■□□□□ 0.05
PKP3-201ENST00000331563 NDUFB4O95168 129 aa15.36■□□□□ 0.05
PKP3-201ENST00000331563 MRPL49Q13405 166 aaKnown RBP15.36■□□□□ 0.05
PKP3-201ENST00000331563 SAXO1Q8IYX7 474 aa15.36■□□□□ 0.05
PKP3-201ENST00000331563 IL1F10Q8WWZ1 152 aa15.36■□□□□ 0.05
PKP3-201ENST00000331563 RNF212BA8MTL3 300 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 DIRC3C9JPN6 131 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 G3V3Y1 287 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 K7ERU9 68 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 PATE4P0C8F1 98 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 TMEM144Q7Z5S9 345 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 NABP1Q96AH0 204 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 STARD4Q96DR4 205 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 ZNF837Q96EG3 531 aaPredicted RBP15.35■□□□□ 0.05
PKP3-201ENST00000331563 DERL1Q9BUN8 251 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 TP53TG3Q9ULZ0 132 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 KIR2DS1A0A191URI9 304 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 OR6C6A6NF89 314 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 ESDP10768 282 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 NPPCP23582 126 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 KIR2DS4P43632 304 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 KIR2DS1Q14954 304 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 ERRFI1Q9UJM3 462 aaPredicted RBP15.35■□□□□ 0.05
PKP3-201ENST00000331563 LINC00310P59036 64 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 RPS16P62249 146 aaKnown RBP15.35■□□□□ 0.05
PKP3-201ENST00000331563 ZNF90Q03938 601 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 Q6ZSR3 168 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 REPIN1Q9BWE0 567 aaKnown RBP15.35■□□□□ 0.05
PKP3-201ENST00000331563 SLC35D1Q9NTN3 355 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 CLN8Q9UBY8 286 aa15.35■□□□□ 0.05
PKP3-201ENST00000331563 NAPSAO96009 420 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 KRASP01116 189 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 RHOGP84095 191 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 FOXL1Q12952 345 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 SFRP2Q96HF1 295 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 ZNF703Q9H7S9 590 aaPredicted RBP15.34■□□□□ 0.05
PKP3-201ENST00000331563 ZNF586Q9NXT0 402 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 PPP1R3CQ9UQK1 317 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 LOC102724200A0A096LPH7 203 aaPredicted RBP15.34■□□□□ 0.05
PKP3-201ENST00000331563 IGKV1-6A0A0C4DH72 117 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 LOC102725191A0A1B0GVB3 256 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 HS3ST1O14792 307 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 TUSC2O75896 110 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 CER1O95813 267 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 COX5AP20674 150 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 PRR27Q6MZM9 219 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 PSMF1Q92530 271 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 SGCZQ96LD1 299 aa15.34■□□□□ 0.05
PKP3-201ENST00000331563 MRPL18Q9H0U6 180 aaKnown RBP15.34■□□□□ 0.05
PKP3-201ENST00000331563 IL36GQ9NZH8 169 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms