RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 OR10G4Q8NGN3 311 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 PPP1R35Q8TAP8 253 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 EDARADDQ8WWZ3 215 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 MUCL1Q96DR8 90 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 ZNF665Q9H7R5 613 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 JPT1Q9UK76 154 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 hCG_1809904A0A1W2PP81 198 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 A0A1W2PR64 198 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 A0A1W2PRV1 198 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 MARCH11A6NNE9 402 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 LHBP01229 141 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 RAB5AP20339 215 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 AGAP20933 346 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 DUTP33316 252 aaKnown RBP12.1□□□□□ -0.47
TPM3-206ENST00000330188 MAS1LP35410 378 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 GPR12P47775 334 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 AKR1D1P51857 326 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 FGF8P55075 233 aaPredicted RBP12.1□□□□□ -0.47
TPM3-206ENST00000330188 CENPVQ7Z7K6 275 aaPredicted RBP12.1□□□□□ -0.47
TPM3-206ENST00000330188 ITLN1Q8WWA0 313 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 PINX1Q96BK5 328 aaKnown RBP12.1□□□□□ -0.47
TPM3-206ENST00000330188 PLPPR2Q96GM1 343 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 YPEL4Q96NS1 127 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 MRPL37Q9BZE1 423 aaKnown RBP12.1□□□□□ -0.47
TPM3-206ENST00000330188 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
TPM3-206ENST00000330188 TIMM9Q9Y5J7 89 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 IGLV3-9A0A075B6K5 115 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 SPRY3O43610 288 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 YPEL1O60688 119 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 BCL2P10415 239 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 ELLP55199 621 aaPredicted RBP12.1□□□□□ -0.47
TPM3-206ENST00000330188 ATP6V1FQ16864 119 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 ZNF561Q8N587 486 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 ZNRF1Q8ND25 227 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 PRSS33Q8NF86 280 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 YPEL2Q96QA6 119 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 SFXN3Q9BWM7 321 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 GNG12Q9UBI6 72 aa12.1□□□□□ -0.47
TPM3-206ENST00000330188 ZFP92A6NM28 416 aa12.09□□□□□ -0.47
TPM3-206ENST00000330188 OR2C1O95371 312 aa12.09□□□□□ -0.47
TPM3-206ENST00000330188 CRYABP02511 175 aaKnown RBP12.09□□□□□ -0.47
TPM3-206ENST00000330188 CEACAM8P31997 349 aaPredicted RBP12.09□□□□□ -0.47
TPM3-206ENST00000330188 DLK1P80370 383 aa12.09□□□□□ -0.47
TPM3-206ENST00000330188 CIB3Q96Q77 187 aaPredicted RBP12.09□□□□□ -0.47
TPM3-206ENST00000330188 TMEM147Q9BVK8 224 aa12.09□□□□□ -0.47
TPM3-206ENST00000330188 DOCK11Q5JSL3 2073 aa12.09□□□□□ -0.47
TPM3-206ENST00000330188 F2RL2O00254 374 aa12.08□□□□□ -0.47
TPM3-206ENST00000330188 IGKV1D-33P01593 117 aa12.08□□□□□ -0.47
TPM3-206ENST00000330188 IGKV1-33P01594 117 aa12.08□□□□□ -0.47
TPM3-206ENST00000330188 TAGLN2P37802 199 aaKnown RBP12.08□□□□□ -0.47
TPM3-206ENST00000330188 LOXL3P58215 753 aa12.08□□□□□ -0.47
TPM3-206ENST00000330188 SPINK9Q5DT21 86 aa12.08□□□□□ -0.47
TPM3-206ENST00000330188 FAM90A2PQ658T7 463 aa12.08□□□□□ -0.47
TPM3-206ENST00000330188 FAM216AQ8WUB2 273 aa12.08□□□□□ -0.47
TPM3-206ENST00000330188 R3HDM4Q96D70 268 aa12.08□□□□□ -0.47
TPM3-206ENST00000330188 MALSU1Q96EH3 234 aa12.08□□□□□ -0.47
TPM3-206ENST00000330188 TVP23CQ96ET8 276 aa12.08□□□□□ -0.47
TPM3-206ENST00000330188 NIPSNAP3BQ9BS92 247 aa12.08□□□□□ -0.47
TPM3-206ENST00000330188 A0A087WWC5 75 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 MAP1LC3B2A6NCE7 125 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 CEBPZOSA8MTT3 80 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.48
TPM3-206ENST00000330188 KLK10O43240 276 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 FCGR3BO75015 233 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 RBMXL2O75526 392 aaKnown RBP12.08□□□□□ -0.48
TPM3-206ENST00000330188 OR9G9P0C7N8 305 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 EDDM3BP56851 147 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 FAM201AQ5SY85 155 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 ACSM6Q6P461 480 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 SLC35E3Q7Z769 313 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 OR10P1Q8NGE3 313 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 MAP1LC3BQ9GZQ8 125 aa12.08□□□□□ -0.48
TPM3-206ENST00000330188 ZNF727A8MUV8 499 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 IFNA4P05014 189 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 GATA4P43694 442 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 ZNF134P52741 427 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 RPS16P62249 146 aaKnown RBP12.07□□□□□ -0.48
TPM3-206ENST00000330188 SNRPEP62304 92 aaKnown RBP12.07□□□□□ -0.48
TPM3-206ENST00000330188 FAM27E3Q08E93 113 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 HNF4GQ14541 408 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 C22orf34Q6ZV56 151 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 RPP25LQ8N5L8 163 aaKnown RBP12.07□□□□□ -0.48
TPM3-206ENST00000330188 FAM57AQ8TBR7 257 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 CA5BP1Q8WTZ4 195 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 QTRT1Q9BXR0 403 aaKnown RBP12.07□□□□□ -0.48
TPM3-206ENST00000330188 IFI27L2Q9H2X8 130 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 CALYQ9NYX4 217 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 CADP27708 2225 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 DSCAMO60469 2012 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 HCFC1P51610 2035 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 M0R1X1 148 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 EIF3GO75821 320 aaKnown RBP eCLIP12.07□□□□□ -0.48
TPM3-206ENST00000330188 HPRT1P00492 218 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 CGB3P0DN86 165 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 CGB7P0DN87 165 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 SELLP14151 372 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 PLA2G5P39877 138 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 RAB11AP62491 216 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 VWC2Q2TAL6 325 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 AARDQ4LEZ3 155 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms