RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 PLXDC1Q8IUK5 500 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 LYG1Q8N1E2 194 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 OCC1Q8TAD7 63 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 CPT1CQ8TCG5 803 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 C1QTNF5Q9BXJ0 243 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 ZNF552Q9H707 407 aaPredicted RBP10.76□□□□□ -0.69
CCDC60-201ENST00000327554 ZNF586Q9NXT0 402 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 IL36BQ9NZH7 164 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 TRAPPC2LH3BP13 241 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 SYNGR1O43759 233 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 HNF1AP20823 631 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
CCDC60-201ENST00000327554 GCSAMLQ5JQS6 135 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 Q6ZN92 141 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 KMT5CQ86Y97 462 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 OR5A2Q8NGI9 324 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 OR1L6Q8NGR2 347 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 APOBEC3DQ96AK3 386 aaPredicted RBP10.76□□□□□ -0.69
CCDC60-201ENST00000327554 STARD4Q96DR4 205 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 CCDC74BQ96LY2 380 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 GNB4Q9HAV0 340 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 TBL2Q9Y4P3 447 aaKnown RBP10.76□□□□□ -0.69
CCDC60-201ENST00000327554 TRAV38-1A0A0B4J264 116 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 LMO7DNF2Z398 122 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 C3orf80F5H4A9 247 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 ZIC3O60481 467 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 LGALS4P56470 323 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 PSG7Q13046 419 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 HLA-DRB5Q30154 266 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 HLA-BQ31612 363 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 ALKBH2Q6NS38 261 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 OR10P1Q8NGE3 313 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 GMPPAQ96IJ6 420 aaPredicted RBP10.75□□□□□ -0.69
CCDC60-201ENST00000327554 TXN2Q99757 166 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 NRN1Q9NPD7 142 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 KCNS2Q9ULS6 477 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 SLC17A3O00476 420 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 FCN1O00602 326 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 P0C879 139 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 MKXQ8IYA7 352 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 DEFB119Q8N690 84 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 RLN3Q8WXF3 142 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 RAB1CQ92928 201 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 ZNF488Q96MN9 340 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 FOXB1Q99853 325 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 QTRT1Q9BXR0 403 aaKnown RBP10.75□□□□□ -0.69
CCDC60-201ENST00000327554 COX11Q9Y6N1 276 aa10.75□□□□□ -0.69
CCDC60-201ENST00000327554 SCO2A0A1W2PP80 73 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 A0A1W2PR77 199 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 DUX1O43812 170 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 WDR1O75083 606 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 TIAF1O95411 115 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 IER3P46695 156 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 ESPL1Q14674 2120 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 UNQ5815/PRO19632Q6UWF5 114 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 COLCA1Q6ZS62 124 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 TMPRSS7Q7RTY8 843 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 DRAM1Q8N682 238 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 KCNE4Q8WWG9 221 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 APH1AQ96BI3 265 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 ALKBH7Q9BT30 221 aaPredicted RBP10.74□□□□□ -0.69
CCDC60-201ENST00000327554 PRDM14Q9GZV8 571 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 SAA2-SAA4A0A096LPE2 208 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 SNURFLB1AK76 121 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 K7EN84 100 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 ZG16O60844 167 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 CEACAM16Q2WEN9 425 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 CEACAM21Q3KPI0 293 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 AARDQ4LEZ3 155 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 SF3B5Q9BWJ5 86 aaKnown RBP10.74□□□□□ -0.69
CCDC60-201ENST00000327554 DEFB126Q9BYW3 111 aa10.74□□□□□ -0.69
CCDC60-201ENST00000327554 ODAMA1E959 279 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 C17orf112F2Z3M2 114 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 ZNHIT1O43257 154 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 ZNF253O75346 499 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 IGHEP01854 428 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 MYF5P13349 255 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 LIFP15018 202 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 CADM4Q8NFZ8 388 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 ZDHHC16Q969W1 377 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 TMEM204Q9BSN7 226 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 SFXN3Q9BWM7 321 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 DLL3Q9NYJ7 618 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 CD207Q9UJ71 328 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 SPTBN5Q9NRC6 3674 aaKnown RBP10.73□□□□□ -0.69
CCDC60-201ENST00000327554 KIAA0100Q14667 2235 aaKnown RBP10.73□□□□□ -0.69
CCDC60-201ENST00000327554 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 LRRC30A6NM36 301 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 RAMP3O60896 148 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 AMTP48728 403 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 PCBD1P61457 104 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 MORN2Q502X0 79 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 RABEPKQ7Z6M1 372 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 LINC00596Q86U02 117 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 UBALD1Q8TB05 177 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 PROK2Q9HC23 129 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 TUBG2Q9NRH3 451 aa10.73□□□□□ -0.69
CCDC60-201ENST00000327554 RBM7Q9Y580 266 aaKnown RBP10.73□□□□□ -0.69
CCDC60-201ENST00000327554 A0A1W2PS18 150 aa10.72□□□□□ -0.69
CCDC60-201ENST00000327554 ZNF716A6NP11 495 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms