RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PATE3B3GLJ2 98 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 TFPI2P48307 235 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 TAS2R60P59551 318 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 UNQ5815/PRO19632Q6UWF5 114 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 EAF1Q96JC9 268 aaPredicted RBP18.1■□□□□ 0.49
RNF40-201ENST00000324685 DLL3Q9NYJ7 618 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 MOB4Q9Y3A3 225 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 GLI3P10071 1580 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 IGKV1-8A0A0C4DH67 115 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 PF4V1P10720 104 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 CX3CL1P78423 397 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 TNFRSF9Q07011 255 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 QTRT1Q9BXR0 403 aaKnown RBP18.1■□□□□ 0.49
RNF40-201ENST00000324685 MRPL32Q9BYC8 188 aaKnown RBP18.1■□□□□ 0.49
RNF40-201ENST00000324685 PHLDA3Q9Y5J5 127 aa18.1■□□□□ 0.49
RNF40-201ENST00000324685 A0A0B4J293 547 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 DDB2Q92466 427 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 AMELYQ99218 206 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 PRDM14Q9GZV8 571 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 OR51M1Q9H341 326 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 NPDC1Q9NQX5 325 aaPredicted RBP18.09■□□□□ 0.49
RNF40-201ENST00000324685 MRPS16Q9Y3D3 137 aaKnown RBP18.09■□□□□ 0.49
RNF40-201ENST00000324685 IGHV3-72A0A0B4J1Y9 119 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 SMUG1Q53HV7 270 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 MOSPD3O75425 235 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 C1QL1O75973 258 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 AGAP20933 346 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 FUT5Q11128 374 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 RAXQ9Y2V3 346 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 UNC119Q13432 240 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 PMS2CLQ68D20 193 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 LNP1A1A4G5 178 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 ODAMA1E959 279 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 PLAUP00749 431 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 ARL14EPLP0DKL9 152 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 COX5BP10606 129 aa18.09■□□□□ 0.49
RNF40-201ENST00000324685 FCGR2BP31994 310 aaPredicted RBP18.09■□□□□ 0.49
RNF40-201ENST00000324685 CIRBPQ14011 172 aaKnown RBP18.09■□□□□ 0.49
RNF40-201ENST00000324685 SMIM8Q96KF7 97 aa18.08■□□□□ 0.49
RNF40-201ENST00000324685 GUCD1Q96NT3 240 aa18.08■□□□□ 0.49
RNF40-201ENST00000324685 HLA-DRB1P01911 266 aa18.08■□□□□ 0.49
RNF40-201ENST00000324685 OR10AG1Q8NH19 301 aa18.08■□□□□ 0.49
RNF40-201ENST00000324685 JOSD1Q15040 202 aaPredicted RBP18.08■□□□□ 0.48
RNF40-201ENST00000324685 OR52M1Q8NGK5 317 aa18.08■□□□□ 0.48
RNF40-201ENST00000324685 WNT2BQ93097 391 aa18.08■□□□□ 0.48
RNF40-201ENST00000324685 RAB9AP51151 201 aa18.08■□□□□ 0.48
RNF40-201ENST00000324685 LAMTOR1Q6IAA8 161 aa18.08■□□□□ 0.48
RNF40-201ENST00000324685 PCSK4Q6UW60 755 aa18.08■□□□□ 0.48
RNF40-201ENST00000324685 TCF24Q7RTU0 167 aa18.08■□□□□ 0.48
RNF40-201ENST00000324685 MS4A3Q96HJ5 214 aa18.08■□□□□ 0.48
RNF40-201ENST00000324685 RAX2Q96IS3 184 aa18.08■□□□□ 0.48
RNF40-201ENST00000324685 H0YL77 283 aa18.07■□□□□ 0.48
RNF40-201ENST00000324685 MYH14Q7Z406 1995 aaKnown RBP18.07■□□□□ 0.48
RNF40-201ENST00000324685 SNRPCP09234 159 aaKnown RBP18.07■□□□□ 0.48
RNF40-201ENST00000324685 hCG_38984A0A1B0GV85 526 aa18.07■□□□□ 0.48
RNF40-201ENST00000324685 SLC25A53Q5H9E4 307 aa18.07■□□□□ 0.48
RNF40-201ENST00000324685 LHFPL6Q9Y693 200 aa18.07■□□□□ 0.48
RNF40-201ENST00000324685 RND3P61587 244 aa18.07■□□□□ 0.48
RNF40-201ENST00000324685 SP7Q8TDD2 431 aaPredicted RBP18.07■□□□□ 0.48
RNF40-201ENST00000324685 RARRES2Q99969 163 aa18.07■□□□□ 0.48
RNF40-201ENST00000324685 C9orf172C9J069 976 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 FGF5P12034 268 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 FAM106AQ4KMX7 169 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 TMEM136Q6ZRR5 245 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 Q96M66 194 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 IGHMP01871 453 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 C1QCP02747 245 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 DANCRP0C864 163 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 TNFSF10P50591 281 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 UCP3P55916 312 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 UNQ9370/PRO34162Q6UXP9 181 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 ZNF826PQ6ZT77 177 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 PARD6GQ9BYG4 376 aaPredicted RBP18.06■□□□□ 0.48
RNF40-201ENST00000324685 MARCH11A6NNE9 402 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 TRGC1P0CF51 173 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 DLX6P56179 175 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 SNAI3Q3KNW1 292 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 OR51G1Q8NGK1 321 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 DDTP30046 118 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 EIF4EBP2Q13542 120 aaPredicted RBP18.06■□□□□ 0.48
RNF40-201ENST00000324685 SLC22A18ASQ8N1D0 253 aa18.06■□□□□ 0.48
RNF40-201ENST00000324685 SRSF12Q8WXF0 261 aaKnown RBP18.06■□□□□ 0.48
RNF40-201ENST00000324685 LMX1BO60663 402 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 CELA2AP08217 269 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 SRIP30626 198 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 C5orf66Q9H5L9 145 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 FXYD3Q14802 87 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 PARLQ9H300 379 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 ZG16O60844 167 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 CTSSP25774 331 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 ZNF146Q15072 292 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 CGB1A6NKQ9 187 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 TSPOP30536 169 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 ATP5G2Q06055 141 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 TMEM187Q14656 261 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 GPR82Q96P67 336 aa18.05■□□□□ 0.48
RNF40-201ENST00000324685 SLC25A17O43808 307 aa18.04■□□□□ 0.48
RNF40-201ENST00000324685 TMEM186Q96B77 213 aa18.04■□□□□ 0.48
RNF40-201ENST00000324685 G6PC2Q9NQR9 355 aa18.04■□□□□ 0.48
RNF40-201ENST00000324685 ZNF729A6NN14 1252 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms