RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 HES3Q5TGS1 186 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 FADS6Q8N9I5 356 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 C17orf51A8MQB3 221 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 PRSS27Q9BQR3 290 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 UBR3Q6ZT12 1888 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 IGHV3OR15-7A0A075B7D8 119 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 SIGLEC5O15389 551 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 IGHV4-34P06331 123 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 ARF6P62330 175 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 RELQ04864 619 aaPredicted RBP14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 DPRXA6NFQ7 191 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 NEUROG1Q92886 237 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 TNFRSF19Q9NS68 423 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 OR2A4O95047 310 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 HBBP68871 147 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 TAF15Q92804 592 aaKnown RBP eCLIP14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 OR2A7Q96R45 310 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 MYF5P13349 255 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 ANOS1P23352 680 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 CTGFP29279 349 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 OR4D11Q8NGI4 311 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 SPSB4Q96A44 273 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 HKR1P10072 659 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 FAM219BQ5XKK7 198 aa14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 C11orf68Q9H3H3 251 aaKnown RBP14.64□□□□□ -0.07
SMCHD1-201ENST00000320876 TSPAN2O60636 221 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 CEACAM21Q3KPI0 293 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 NIT1Q86X76 327 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 ALKBH7Q9BT30 221 aaPredicted RBP14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 HDHD3Q9BSH5 251 aaPredicted RBP14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 C2CD4DB7Z1M9 353 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 TRGC1P0CF51 173 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 PRSS12P56730 875 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 MGAT2Q10469 447 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 HIKESHIQ53FT3 197 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 ZNF430Q9H8G1 570 aaPredicted RBP14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 DMRTA1Q5VZB9 504 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 MC5RP33032 325 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 NHLRC3Q5JS37 347 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 ZNF600Q6ZNG1 722 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 VN1R4Q7Z5H5 301 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 AQP3Q92482 292 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 BEX4Q9NWD9 120 aaPredicted RBP14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 PSG6Q00889 435 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 MEF2CQ06413 473 aaPredicted RBP14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 TCF23Q7RTU1 214 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 TLNRD1Q9H1K6 362 aa14.63□□□□□ -0.07
SMCHD1-201ENST00000320876 IGHV3-21A0A0B4J1V1 117 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 EPHA8P29322 1005 aaPredicted RBP14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 LOXL3P58215 753 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 OR2Y1Q8NGV0 311 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 PPP1R3EQ9H7J1 279 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 NPIPB8E9PQR5 432 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 NPIPB9F8W1W9 429 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 NPIPB7O75200 414 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 CFDP00746 253 aaPredicted RBP14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 CXCL10P02778 98 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 PRDX2P32119 198 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 GCSAMLQ5JQS6 135 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 C2orf88Q9BSF0 95 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 TRIOBPQ9H2D6 2365 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 B4E171 279 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 BGLAPP02818 100 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 CTAG1AP78358 180 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 ATOH7Q8N100 152 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 ZNF205O95201 554 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 DNAJC4Q9NNZ3 241 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 GPR82Q96P67 336 aa14.62□□□□□ -0.07
SMCHD1-201ENST00000320876 ISG15P05161 165 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 FAM106CPP0CH98 169 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 FGF12P61328 243 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 NHSL1Q5SYE7 1610 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 H0YL77 283 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 SOX8P57073 446 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 MEIG1Q5JSS6 88 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 A0A1W2PPC1 479 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 C1QL1O75973 258 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 MAGEA5P43359 124 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 ZDHHC8Q9ULC8 765 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 MRPL32Q9BYC8 188 aaKnown RBP14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 A0A1W2PQM1 296 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 A0A1W2PRD5 423 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 A0A1W2PRF3 423 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 A0A1W2PRM7 423 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 LIFP15018 202 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 MBNL2Q5VZF2 373 aaKnown RBP14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 FBXW9Q5XUX1 488 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 WFDC3Q8IUB2 231 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 PLSCR2Q9NRY7 297 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 ERVH48-1M5A8F1 160 aa14.61□□□□□ -0.07
SMCHD1-201ENST00000320876 C19orf67A6NJJ6 358 aa14.6□□□□□ -0.07
SMCHD1-201ENST00000320876 KCNS1Q96KK3 526 aa14.6□□□□□ -0.07
SMCHD1-201ENST00000320876 SH3BGRL3Q9H299 93 aa14.6□□□□□ -0.07
SMCHD1-201ENST00000320876 HELZP42694 1942 aaKnown RBP14.6□□□□□ -0.07
SMCHD1-201ENST00000320876 TSC2P49815 1807 aa14.6□□□□□ -0.07
SMCHD1-201ENST00000320876 MOSPD3O75425 235 aa14.6□□□□□ -0.07
SMCHD1-201ENST00000320876 REG1BP48304 166 aa14.6□□□□□ -0.07
SMCHD1-201ENST00000320876 MS4A5Q9H3V2 200 aa14.6□□□□□ -0.07
SMCHD1-201ENST00000320876 LHX9Q9NQ69 397 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms