RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TFF3Q07654 80 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 MRPL49Q13405 166 aaKnown RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 ANKRD37Q7Z713 158 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 CARFQ8N187 725 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 ZDHHC16Q969W1 377 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 ANAPC16Q96DE5 110 aa6.45□□□□□ -1.38
CDHR3-201ENST00000317716 CISD1Q9NZ45 108 aaKnown RBP6.45□□□□□ -1.38
CDHR3-201ENST00000317716 ZNF292O60281 2723 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 E9PLN8 166 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 SPINT2O43291 252 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 VAMP5O95183 116 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 GLB1P16278 677 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 SRIP30626 198 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 GPR12P47775 334 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 GABRA6Q16445 453 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 MIC13Q5XKP0 118 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 SPSB3Q6PJ21 355 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 MSI2Q96DH6 328 aaKnown RBP6.44□□□□□ -1.38
CDHR3-201ENST00000317716 ABHD14BQ96IU4 210 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 LYZL4Q96KX0 146 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 DERL1Q9BUN8 251 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 LIME1Q9H400 295 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 OR6C3Q9NZP0 311 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 CDIPTO14735 213 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 GALR2O43603 387 aaPredicted RBP6.44□□□□□ -1.38
CDHR3-201ENST00000317716 HOXC4P09017 264 aaPredicted RBP6.44□□□□□ -1.38
CDHR3-201ENST00000317716 PSG5Q15238 335 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 PLPPR5Q32ZL2 321 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 DOLPP1Q86YN1 238 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 AGBL5Q8NDL9 886 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 ZNF738Q8NE65 137 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 OR2D3Q8NGH3 330 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 FLVCR1-AS1Q8TAF5 88 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 ZCCHC14Q8WYQ9 949 aaKnown RBP6.44□□□□□ -1.38
CDHR3-201ENST00000317716 HSD17B10Q99714 261 aaKnown RBP6.44□□□□□ -1.38
CDHR3-201ENST00000317716 AKIRIN1Q9H9L7 192 aaPredicted RBP6.44□□□□□ -1.38
CDHR3-201ENST00000317716 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.44□□□□□ -1.38
CDHR3-201ENST00000317716 PILRBQ9UKJ0 227 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 OR2W1Q9Y3N9 320 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 NUP210Q8TEM1 1887 aaPredicted RBP6.44□□□□□ -1.38
CDHR3-201ENST00000317716 PIGBOS1A0A0B4J2F0 54 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 IGHEP01854 428 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 RPEL1Q2QD12 228 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 WDFY1Q8IWB7 410 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 OR5R1Q8NH85 324 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 C22orf15Q8WYQ4 148 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 PCDH15Q96QU1 1955 aa6.44□□□□□ -1.38
CDHR3-201ENST00000317716 TLN1Q9Y490 2541 aaKnown RBP6.43□□□□□ -1.38
CDHR3-201ENST00000317716 A0A087WWC5 75 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 A0A0J9YW62 118 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 A0A1W2PQD3 144 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 TIMM8AO60220 97 aaPredicted RBP6.43□□□□□ -1.38
CDHR3-201ENST00000317716 EPHA8P29322 1005 aaPredicted RBP6.43□□□□□ -1.38
CDHR3-201ENST00000317716 ADMP35318 185 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 FOLR3P41439 243 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 MFAP2P55001 183 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 SRSF4Q08170 494 aaKnown RBP6.43□□□□□ -1.38
CDHR3-201ENST00000317716 ABHD17BQ5VST6 288 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 SLC25A47Q6Q0C1 308 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 SMIM15Q7Z3B0 74 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 S100A7AQ86SG5 101 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 VKORC1L1Q8N0U8 176 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 PMCHL2Q9BQD1 86 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 DUSP23Q9BVJ7 150 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 OCIAD1Q9NX40 245 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 ABCA4P78363 2273 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 PRR33A8MZF0 331 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 RPL36A-HNRNPH2H7BZ11 118 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 CA11O75493 328 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 SRSF10O75494 262 aaKnown RBP6.43□□□□□ -1.38
CDHR3-201ENST00000317716 IGHV3-48P01763 117 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 ANOS1P23352 680 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 ARL3P36405 182 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 PMELP40967 661 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 PSG4Q00888 419 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 TMEM211Q6ICI0 200 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 CYP2G1PQ6ZSU1 146 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 MUC15Q8N387 334 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 FGFRL1Q8N441 504 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 CISD2Q8N5K1 135 aaKnown RBP6.43□□□□□ -1.38
CDHR3-201ENST00000317716 OR10D3Q8NH80 312 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 FAM216AQ8WUB2 273 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 BLNKQ8WV28 456 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 GALMQ96C23 342 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 RIMS4Q9H426 269 aaPredicted RBP6.43□□□□□ -1.38
CDHR3-201ENST00000317716 TBL2Q9Y4P3 447 aaKnown RBP6.43□□□□□ -1.38
CDHR3-201ENST00000317716 WIPI2Q9Y4P8 454 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 ASPMQ8IZT6 3477 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 FAM208BQ5VWN6 2430 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 MARCH11A6NNE9 402 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 PLAUP00749 431 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 DUSP3P51452 185 aaPredicted RBP6.43□□□□□ -1.38
CDHR3-201ENST00000317716 UBE2G1P62253 170 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 QRFPP83859 136 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 ATP6V1FQ16864 119 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 WDR74Q6RFH5 385 aaPredicted RBP6.43□□□□□ -1.38
CDHR3-201ENST00000317716 SSX8Q7RTT4 187 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 ZNF573Q86YE8 665 aa6.43□□□□□ -1.38
CDHR3-201ENST00000317716 RBMXL3Q8N7X1 1067 aaKnown RBP6.43□□□□□ -1.38
CDHR3-201ENST00000317716 RAB37Q96AX2 223 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms