RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 LURAP1Q96LR2 239 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 FAM173AQ9BQD7 235 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 SRD5A3Q9H8P0 318 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 ZMAT5Q9UDW3 170 aaKnown RBP6.4□□□□□ -1.39
CNOT4-201ENST00000315544 GOLGA4Q13439 2230 aaKnown RBP6.39□□□□□ -1.39
CNOT4-201ENST00000315544 C13orf42A0A1B0GVH6 325 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 ODAMA1E959 279 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 LINC01546A6NGU7 62 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 GATCO43716 136 aaKnown RBP6.39□□□□□ -1.39
CNOT4-201ENST00000315544 CLDN1O95832 211 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 CEACAM8P31997 349 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-201ENST00000315544 GPM6AP51674 278 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 TMEM41BQ5BJD5 291 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 TPTE2P1Q5T6R2 138 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 ZNF664Q8N3J9 261 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 AJUBAQ96IF1 538 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 FER1L6-AS2Q96M78 137 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 RIMS4Q9H426 269 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-201ENST00000315544 RBKSQ9H477 322 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 ANKRD11Q6UB99 2663 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-201ENST00000315544 TMEM210A6NLX4 147 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 KBTBD11O94819 623 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 VENTXO95231 258 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 GLP1RP43220 463 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 MAGEA5P43359 124 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 SLC10A1Q14973 349 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 TEX36Q5VZQ5 186 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 PRSS58Q8IYP2 241 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 TAF15Q92804 592 aaKnown RBP eCLIP6.39□□□□□ -1.39
CNOT4-201ENST00000315544 DACT3Q96B18 629 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-201ENST00000315544 TMPRSS5Q9H3S3 457 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 C19orf25Q9UFG5 118 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-201ENST00000315544 LY96Q9Y6Y9 160 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 GPR179Q6PRD1 2367 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 CEP250Q9BV73 2442 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 CRYGCP07315 174 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 PVALBP20472 110 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-201ENST00000315544 FOLR3P41439 243 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 DEFA5Q01523 94 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 TEX43Q6ZNM6 134 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 COX8CQ7Z4L0 72 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-201ENST00000315544 FGFRL1Q8N441 504 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 C8orf31Q8N9H6 132 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 BEND2Q8NDZ0 799 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 NPRL2Q8WTW4 380 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 RAB40CQ96S21 281 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 NPCDR1Q9BY65 106 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 ZNF665Q9H7R5 613 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 ZNF286AQ9HBT8 521 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 LRFN1Q9P244 771 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 MEMO1Q9Y316 297 aa6.39□□□□□ -1.39
CNOT4-201ENST00000315544 FAM186AA6NE01 2351 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 GJE1A6NN92 205 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 CBR1P16152 277 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 CHRFAM7AQ494W8 412 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 PHLDA2Q53GA4 152 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 NCR3LG1Q68D85 454 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 C17orf78Q8N4C9 275 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 ZNF71Q9NQZ8 489 aaPredicted RBP6.38□□□□□ -1.39
CNOT4-201ENST00000315544 GCN1Q92616 2671 aaKnown RBP6.38□□□□□ -1.39
CNOT4-201ENST00000315544 TP53I11O14683 189 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 MRPS12O15235 138 aaKnown RBP6.38□□□□□ -1.39
CNOT4-201ENST00000315544 KLK10O43240 276 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 KNG1P01042 644 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 CCL2P13500 99 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 TMEM164Q5U3C3 297 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 TMEM183AQ8IXX5 376 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 NAXEQ8NCW5 288 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 ELOVL1Q9BW60 279 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 OR51B6Q9H340 312 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 SAV1Q9H4B6 383 aaPredicted RBP6.38□□□□□ -1.39
CNOT4-201ENST00000315544 PLEK2Q9NYT0 353 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 MIOXQ9UGB7 285 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 FAM215AQ9Y5M1 114 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 SLC25A15Q9Y619 301 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 V9GYV3 84 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 GON4LQ3T8J9 2241 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 C5orf51A6NDU8 294 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 SRRM5B3KS81 715 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 E7EUB6 86 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 IL2RGP31785 369 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 GDF5OSQ5U4N7 250 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 TREML4Q6UXN2 200 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 MDP1Q86V88 176 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 TCTEX1D1Q8N7M0 179 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 MLST8Q9BVC4 326 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 OTOGQ6ZRI0 2925 aa6.38□□□□□ -1.39
CNOT4-201ENST00000315544 MBD3L4A6NDZ8 208 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-201ENST00000315544 MBD3L3A6NE82 208 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-201ENST00000315544 MBD3L5A6NJ08 208 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-201ENST00000315544 HLA-HP01893 362 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 STAG3L2P0CL84 134 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 STAG3L3P0CL85 134 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 RAB4AP20338 218 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 FBLN7Q53RD9 439 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 OR2B11Q5JQS5 317 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 HLA-DQA1Q5Y7H0 255 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 STUMQ69YW2 141 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 SPATA12Q7Z6I5 190 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms