RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 PTPMT1Q8WUK0 201 aaPredicted RBP13.47□□□□□ -0.25
HCFC1-201ENST00000310441 CEACAM21Q3KPI0 293 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 PIGYQ3MUY2 71 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 HELZP42694 1942 aaKnown RBP13.46□□□□□ -0.25
HCFC1-201ENST00000310441 NPFFO15130 113 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 FSTP19883 344 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 RPL27AP46776 148 aaKnown RBP13.46□□□□□ -0.25
HCFC1-201ENST00000310441 OR4D5Q8NGN0 318 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 DNAJC4Q9NNZ3 241 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 FSCN3Q9NQT6 498 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 ASPDHA6ND91 283 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 RBMY1BA6NDE4 496 aaKnown RBP13.46□□□□□ -0.25
HCFC1-201ENST00000310441 RBMY1EA6NEQ0 496 aaKnown RBP13.46□□□□□ -0.25
HCFC1-201ENST00000310441 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 SLC25A17O43808 307 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 RBMY1DP0C7P1 496 aaKnown RBP13.46□□□□□ -0.25
HCFC1-201ENST00000310441 RBMY1A1P0DJD3 496 aaKnown RBP13.46□□□□□ -0.25
HCFC1-201ENST00000310441 RBMY1CP0DJD4 496 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 MFAP4P55083 255 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 SFXN3Q9BWM7 321 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 ATP5LO75964 103 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 PRF1P14222 555 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 SUMO2P61956 95 aaKnown RBP13.46□□□□□ -0.25
HCFC1-201ENST00000310441 ADAD2Q8NCV1 583 aaKnown RBP13.46□□□□□ -0.25
HCFC1-201ENST00000310441 IL36RNQ9UBH0 155 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 HSF4Q9ULV5 492 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 B4E171 279 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 NDUFS8O00217 210 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 KRTCAP3Q53RY4 240 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 SPSB4Q96A44 273 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 ZNF414Q96IQ9 312 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 OR11H12B2RN74 326 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 INSL4Q14641 139 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 SAPCD1Q5SSQ6 148 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 OR11H1Q8NG94 326 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 OR10S1Q8NGN2 331 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 OR11H2Q8NH07 326 aa13.46□□□□□ -0.25
HCFC1-201ENST00000310441 OR4C45A6NMZ5 311 aa13.46□□□□□ -0.26
HCFC1-201ENST00000310441 AGAP20933 346 aa13.46□□□□□ -0.26
HCFC1-201ENST00000310441 OR11H7Q8NGC8 314 aa13.46□□□□□ -0.26
HCFC1-201ENST00000310441 OR1K1Q8NGR3 316 aa13.46□□□□□ -0.26
HCFC1-201ENST00000310441 CDC42EP2O14613 210 aa13.46□□□□□ -0.26
HCFC1-201ENST00000310441 EML2O95834 649 aa13.46□□□□□ -0.26
HCFC1-201ENST00000310441 PKIBQ9C010 78 aa13.46□□□□□ -0.26
HCFC1-201ENST00000310441 NDUFB4O95168 129 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 HBBP68871 147 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 LRTM2Q8N967 370 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 DMRT1Q9Y5R6 373 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 IGHV3-13P01766 116 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 IGHV3-7P01780 117 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 CA7P43166 264 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 CACNG7P62955 275 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 CX3CL1P78423 397 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 C10orf111Q8N326 155 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 ZCCHC14Q8WYQ9 949 aaKnown RBP13.45□□□□□ -0.26
HCFC1-201ENST00000310441 PKDREJQ9NTG1 2253 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.45□□□□□ -0.26
HCFC1-201ENST00000310441 THSD4Q6ZMP0 1018 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 ARL6IP6Q8N6S5 226 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 DPH3Q96FX2 82 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 ZNF506Q5JVG8 444 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 CT55Q8WUE5 264 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 COX14Q96I36 57 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 SLC6A13Q9NSD5 602 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 KCNK7Q9Y2U2 307 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 LIFP15018 202 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 OR51G1Q8NGK1 321 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 PIMREGQ9BSJ6 248 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 PPIAL4EA0A075B759 164 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 A1L4Q6 167 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 PPIAL4DF5H284 164 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 PPIAL4FP0DN26 164 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 FGF12P61328 243 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 PPIAL4AQ9Y536 164 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 LRP5O75197 1615 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 TMSB15BA0A087X1C1 80 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 GDF9O60383 454 aa13.45□□□□□ -0.26
HCFC1-201ENST00000310441 MGST3O14880 152 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 PRKNO60260 465 aaPredicted RBP13.44□□□□□ -0.26
HCFC1-201ENST00000310441 IGHV4-34P06331 123 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 RPS11P62280 158 aaKnown RBP eCLIP13.44□□□□□ -0.26
HCFC1-201ENST00000310441 ZNF385CQ66K41 422 aaPredicted RBP13.44□□□□□ -0.26
HCFC1-201ENST00000310441 Q6AWC8 147 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 MVDP53602 400 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 COL10A1Q03692 680 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 TMEM190Q8WZ59 177 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 GPX1P07203 203 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 ARL14EPLP0DKL9 152 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 PLAURQ03405 335 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 ZNF56Q15929 161 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 PRSS27Q9BQR3 290 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 HOXB1P14653 301 aaPredicted RBP13.44□□□□□ -0.26
HCFC1-201ENST00000310441 ASIPP42127 132 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 RBM38Q9H0Z9 239 aaKnown RBP13.44□□□□□ -0.26
HCFC1-201ENST00000310441 IGF2P01344 180 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 EML6Q6ZMW3 1958 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 CLDN14O95500 239 aa13.44□□□□□ -0.26
HCFC1-201ENST00000310441 ZNF658BQ4V348 819 aaPredicted RBP13.44□□□□□ -0.26
HCFC1-201ENST00000310441 PLSCR2Q9NRY7 297 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 NKG7Q16617 165 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms