RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
DDX54-201ENST00000306014 TEPPQ6URK8 271 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 MOGAT3Q86VF5 341 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 PKIBQ9C010 78 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 PNRC2Q9NPJ4 139 aaKnown RBP11.32□□□□□ -0.6
DDX54-201ENST00000306014 ZNF729A6NN14 1252 aaPredicted RBP11.32□□□□□ -0.6
DDX54-201ENST00000306014 HES1Q14469 280 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 SPNS3Q6ZMD2 512 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 BLNKQ8WV28 456 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 ADH4P08319 380 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 CELA3AP09093 270 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 AGAP20933 346 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 UCP2P55851 309 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 MIC13Q5XKP0 118 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 NGBQ9NPG2 151 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 TMEM167BQ9NRX6 74 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 GLRX2Q9NS18 164 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 TECRQ9NZ01 308 aaKnown RBP11.32□□□□□ -0.6
DDX54-201ENST00000306014 PI4KAP42356 2102 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 IGLV3-32A0A0A0MS00 114 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 KLF3P57682 345 aaPredicted RBP11.32□□□□□ -0.6
DDX54-201ENST00000306014 PAX5Q02548 391 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 MRPL14Q6P1L8 145 aaKnown RBP11.32□□□□□ -0.6
DDX54-201ENST00000306014 WDR73Q6P4I2 378 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 HEPN1Q6WQI6 88 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 OR5P3Q8WZ94 311 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 IMMP1LQ96LU5 166 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 CHRDL1Q9BU40 450 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 SRD5A3Q9H8P0 318 aa11.32□□□□□ -0.6
DDX54-201ENST00000306014 ACACAQ13085 2346 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 FAM90A26D6RGX4 464 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 K7EQM0 130 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 HIST1H2BKO60814 126 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 GCGP01275 180 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 HIST1H2BJP06899 126 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 SNRPCP09234 159 aaKnown RBP11.31□□□□□ -0.6
DDX54-201ENST00000306014 FOLR2P14207 255 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 HIST1H2BOP23527 126 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 HIST1H2BBP33778 126 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 SRP14P37108 136 aaKnown RBP11.31□□□□□ -0.6
DDX54-201ENST00000306014 HIST1H2BDP58876 126 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 HIST1H2BCP62807 126 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 ELOBQ15370 118 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 HIST2H2BEQ16778 126 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.31□□□□□ -0.6
DDX54-201ENST00000306014 C5orf24Q7Z6I8 188 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 OR4D5Q8NGN0 318 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 HIST1H2BHQ93079 126 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 HIST1H2BNQ99877 126 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 HIST1H2BMQ99879 126 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 REPIN1Q9BWE0 567 aaKnown RBP11.31□□□□□ -0.6
DDX54-201ENST00000306014 POLEQ07864 2286 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 A0A087WWC5 75 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 TMEM210A6NLX4 147 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 ZNF891A8MT65 544 aaPredicted RBP11.31□□□□□ -0.6
DDX54-201ENST00000306014 Q6ZN92 141 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 PPP1R32Q7Z5V6 425 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 LINC00469Q8N7U9 141 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 FGFBP3Q8TAT2 258 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 HSPB9Q9BQS6 159 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 B4E171 279 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 SLC25A5P05141 298 aaKnown RBP11.31□□□□□ -0.6
DDX54-201ENST00000306014 TSPAN7P41732 249 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 KIR2DS2P43631 304 aa11.31□□□□□ -0.6
DDX54-201ENST00000306014 SPAARA0A1B0GVQ0 90 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 PRDX2P32119 198 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 S100A7AQ86SG5 101 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 TMEM183AQ8IXX5 376 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 LRTM2Q8N967 370 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 C1QTNF5Q9BXJ0 243 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 CT45A10P0DMU9 189 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 TNFAIP6P98066 277 aaPredicted RBP11.3□□□□□ -0.6
DDX54-201ENST00000306014 ID3Q02535 119 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 LRRC75BQ2VPJ9 315 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 INO80CQ6PI98 192 aaPredicted RBP11.3□□□□□ -0.6
DDX54-201ENST00000306014 TCTEX1D1Q8N7M0 179 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 NABP1Q96AH0 204 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 NPVFQ9HCQ7 196 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 FER1L5A0AVI2 2057 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 TMEM250H0YL14 139 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 HPRT1P00492 218 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 UMODP07911 640 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 ORM2P19652 201 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 ZIC4Q8N9L1 334 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 ZDHHC16Q969W1 377 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 STARD4Q96DR4 205 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 MISP3Q96FF7 219 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 SDF2L1Q9HCN8 221 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 NAGKQ9UJ70 344 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 SHANK1Q9Y566 2161 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 PCNTO95613 3336 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 GRIFINA4D1Z8 144 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 C21orf140B9A014 251 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 E9PLN8 166 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 CLDN14O95500 239 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 CXCL1P09341 107 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 COX5BP10606 129 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms