RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 COTL1Q14019 142 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 ZNF79Q15937 498 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 ACP7Q6ZNF0 438 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 STPG3Q8N7X2 389 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 OR4C12Q96R67 309 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 METTL26Q96S19 204 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 PPP1R3EQ9H7J1 279 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 OR2A4O95047 310 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 TGFAP01135 160 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 OR2A7Q96R45 310 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 NXF2Q9GZY0 626 aaKnown RBP15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 TLNRD1Q9H1K6 362 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 ERVS71-1P61550 626 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 LAMTOR1Q6IAA8 161 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 HCP5Q6MZN7 132 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 EBLN2Q6P2I7 272 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 RNASEKQ6P5S7 137 aaKnown RBP15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 CBLN4Q9NTU7 201 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 ZNF646O15015 1829 aaPredicted RBP15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 BMPR1BO00238 502 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 PGLYRP1O75594 196 aaPredicted RBP15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 CRYBA2P53672 197 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 C1QTNF12Q5T7M4 302 aa15.1■□□□□ 0.01
CDC42EP3-201ENST00000295324 IGKV1D-43A0A0B4J1Z2 117 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 MED19A0JLT2 244 aaPredicted RBP15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 CLDN34H7C241 214 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 MMP9P14780 707 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 TIMP3P35625 211 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 PPOXP50336 477 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 LCN2P80188 198 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 SLC35E3Q7Z769 313 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 TMEM37Q8WXS4 190 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 GPR132Q9UNW8 380 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 ARHGEF17Q96PE2 2063 aaPredicted RBP15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 TMEM97Q5BJF2 176 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 REPIN1Q9BWE0 567 aaKnown RBP15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 C11orf94C9JXX5 98 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 ANGPTL6Q8NI99 470 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 COL6A6A6NMZ7 2263 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 TMEM14DPA8MWL7 114 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 ORM1P02763 201 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 MFAP4P55083 255 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 HSPE1P61604 102 aaKnown RBP15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 DPM3Q9P2X0 92 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 SPRR3Q9UBC9 169 aa15.09■□□□□ 0.01
CDC42EP3-201ENST00000295324 TM4SF5O14894 197 aa15.08■□□□□ 0.01
CDC42EP3-201ENST00000295324 IL18BPO95998 194 aa15.08■□□□□ 0.01
CDC42EP3-201ENST00000295324 HIST1H3AP68431 136 aa15.08■□□□□ 0.01
CDC42EP3-201ENST00000295324 LRRC75AQ8NAA5 344 aa15.08■□□□□ 0.01
CDC42EP3-201ENST00000295324 ZNF418Q8TF45 676 aaPredicted RBP15.08■□□□□ 0.01
CDC42EP3-201ENST00000295324 YAE1D1Q9NRH1 226 aa15.08■□□□□ 0.01
CDC42EP3-201ENST00000295324 WNT9BO14905 357 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 CXorf1O96002 111 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 DHRS11Q6UWP2 260 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 FGFRL1Q8N441 504 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 C5orf17Q8NAS9 161 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 POC1AQ8NBT0 407 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 TMEM140Q9NV12 185 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 SEMA5BQ9P283 1151 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 ANKRD36A6QL64 1941 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 TMEM183BQ1AE95 376 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 UFC1Q9Y3C8 167 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 IGSF23A1L1A6 192 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 OR2T8A6NH00 312 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 PF4P02776 101 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 RPL7P18124 248 aaKnown RBP15.08■□□□□ 0
CDC42EP3-201ENST00000295324 TFPI2P48307 235 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 NHLH1Q02575 133 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 NHLH2Q02577 135 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 RNFT1Q5M7Z0 435 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 LEAP2Q969E1 77 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 NAT8BQ9UHF3 227 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 TMEM8BA6NDV4 472 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 RBFOX3A6NFN3 312 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 IQCF6A8MYZ5 107 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 MPDU1O75352 247 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 CDKN1AP38936 164 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 FAM90A1Q86YD7 464 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 C7orf69Q9H7B7 122 aa15.08■□□□□ 0
CDC42EP3-201ENST00000295324 TRAV30A0A087WSZ9 112 aa15.07■□□□□ 0
CDC42EP3-201ENST00000295324 CTXND1A0A1B0GTU2 59 aa15.07■□□□□ 0
CDC42EP3-201ENST00000295324 PINLYPA6NC86 204 aa15.07■□□□□ 0
CDC42EP3-201ENST00000295324 HSD17B13Q7Z5P4 300 aaPredicted RBP15.07■□□□□ 0
CDC42EP3-201ENST00000295324 ZNF837Q96EG3 531 aaPredicted RBP15.07■□□□□ 0
CDC42EP3-201ENST00000295324 NEURL2Q9BR09 285 aa15.07■□□□□ 0
CDC42EP3-201ENST00000295324 FAM157CP0CG43 387 aa15.07■□□□□ 0
CDC42EP3-201ENST00000295324 SNRPEP62304 92 aaKnown RBP15.07■□□□□ 0
CDC42EP3-201ENST00000295324 SLC25A38Q96DW6 304 aa15.07■□□□□ 0
CDC42EP3-201ENST00000295324 RBM14Q96PK6 669 aaKnown RBP15.07■□□□□ 0
CDC42EP3-201ENST00000295324 QTRT1Q9BXR0 403 aaKnown RBP15.07■□□□□ 0
CDC42EP3-201ENST00000295324 CHD5Q8TDI0 1954 aa15.07■□□□□ 0
CDC42EP3-201ENST00000295324 COL8A1P27658 744 aa15.07■□□□□ 0
CDC42EP3-201ENST00000295324 OR10J1P30954 320 aa15.07■□□□□ 0
CDC42EP3-201ENST00000295324 CXorf66Q5JRM2 361 aaPredicted RBP15.07■□□□□ 0
CDC42EP3-201ENST00000295324 MEF2CQ06413 473 aaPredicted RBP15.06■□□□□ 0
CDC42EP3-201ENST00000295324 LRRC75BQ2VPJ9 315 aa15.06■□□□□ 0
CDC42EP3-201ENST00000295324 FAM90A26D6RGX4 464 aa15.06■□□□□ 0
CDC42EP3-201ENST00000295324 CXCL3P19876 107 aa15.06■□□□□ 0
CDC42EP3-201ENST00000295324 LSM10Q969L4 123 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms