RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 OR5A2Q8NGI9 324 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 ABHD3Q8WU67 409 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 DLL3Q9NYJ7 618 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 IGLV3-12A0A075B6K2 115 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 SNURFLB1AK76 121 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 C17orf112F2Z3M2 114 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 SPATA45Q537H7 98 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 TEX43Q6ZNM6 134 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 Q6ZVH6 145 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 FAM58AQ8N1B3 248 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 DRAM1Q8N682 238 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 ZNF586Q9NXT0 402 aa8.67□□□□□ -1.02
LMX1A-201ENST00000294816 GDF9O60383 454 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 NGFP01138 241 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 AMTP48728 403 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 HNRNPA3P51991 378 aaKnown RBP8.66□□□□□ -1.02
LMX1A-201ENST00000294816 UBE2NP61088 152 aaKnown RBP8.66□□□□□ -1.02
LMX1A-201ENST00000294816 SLC35B1P78383 322 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 SRYQ05066 204 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 ETFRF1Q6IPR1 90 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 CARFQ8N187 725 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 SLC35E1Q96K37 410 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 ASCL3Q9NQ33 180 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 SCO2A0A1W2PP80 73 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 MLNRO43193 412 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 PDE6DO43924 150 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 RHBDL1O75783 438 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 CRYABP02511 175 aaKnown RBP8.66□□□□□ -1.02
LMX1A-201ENST00000294816 OR5G3P0C626 314 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 SSR4P51571 173 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 NXPH1P58417 271 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 RAC3P60763 192 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 HTD2P86397 168 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 CEACAM21Q3KPI0 293 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 TMEM144Q7Z5S9 345 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 ATOH7Q8N100 152 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 STARD4Q96DR4 205 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 TP53TG3Q9ULZ0 132 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 ZFP30Q9Y2G7 519 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 WIPI2Q9Y4P8 454 aa8.66□□□□□ -1.02
LMX1A-201ENST00000294816 LRP5LA4QPB2 252 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 GJE1A6NN92 205 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 WNT2P09544 360 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 FRMD6-AS1P0C7T7 363 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 CA6P23280 308 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 RPP30P78346 268 aaKnown RBP8.65□□□□□ -1.02
LMX1A-201ENST00000294816 ARF1P84077 181 aaKnown RBP8.65□□□□□ -1.02
LMX1A-201ENST00000294816 WIPI1Q5MNZ9 446 aaPredicted RBP8.65□□□□□ -1.02
LMX1A-201ENST00000294816 SLC25A45Q8N413 288 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 CADM4Q8NFZ8 388 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 APOBEC3DQ96AK3 386 aaPredicted RBP8.65□□□□□ -1.02
LMX1A-201ENST00000294816 FBXL7Q9UJT9 491 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 USF3Q68DE3 2245 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 FREM1Q5H8C1 2179 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 ODAMA1E959 279 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 IGLV3-19P01714 112 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 IGHEP01854 428 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 NTF3P20783 257 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 FOXL1Q12952 345 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 ATP6V1FQ16864 119 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 SPATA46Q5T0L3 261 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 FAM53AQ6NSI3 398 aaPredicted RBP8.65□□□□□ -1.02
LMX1A-201ENST00000294816 TIPARPQ7Z3E1 657 aaKnown RBP8.65□□□□□ -1.02
LMX1A-201ENST00000294816 KMT5CQ86Y97 462 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 STPG4Q8N801 248 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 OR10D3Q8NH80 312 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 OCC1Q8TAD7 63 aa8.65□□□□□ -1.02
LMX1A-201ENST00000294816 PRUNE2Q8WUY3 3088 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 A0A0G2JMM0 328 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 A0A1W2PPB8 328 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 A0A1W2PRS3 328 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 ANKRD30BLA7E2S9 258 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 KIR3DP1A8MWS1 328 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 SH2D1BO14796 132 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 S1PR2O95136 353 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 HINT1P49773 126 aaPredicted RBP8.65□□□□□ -1.03
LMX1A-201ENST00000294816 SRSF7Q16629 238 aaKnown RBP eCLIP8.65□□□□□ -1.03
LMX1A-201ENST00000294816 C1QTNF5Q9BXJ0 243 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 WNT10AQ9GZT5 417 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 OR2D2Q9H210 308 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 FSCN3Q9NQT6 498 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.65□□□□□ -1.03
LMX1A-201ENST00000294816 RNF114Q9Y508 228 aa8.65□□□□□ -1.03
LMX1A-201ENST00000294816 TRBV20OR9-2A0A075B6H5 130 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 IGLV2-14P01704 120 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 ARL14EPLP0DKL9 152 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 LHX2P50458 406 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 HLA-DRB5Q30154 266 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 RNASE8Q8TDE3 154 aaKnown RBP8.64□□□□□ -1.03
LMX1A-201ENST00000294816 SF3B5Q9BWJ5 86 aaKnown RBP8.64□□□□□ -1.03
LMX1A-201ENST00000294816 NAT8BQ9UHF3 227 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 RAC2P15153 192 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 TCL1AP56279 114 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 LINC00310P59036 64 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 PDLIM3Q53GG5 364 aaPredicted RBP8.64□□□□□ -1.03
LMX1A-201ENST00000294816 KRTCAP3Q53RY4 240 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 H2BFWTQ7Z2G1 175 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 PARD6GQ9BYG4 376 aaPredicted RBP8.64□□□□□ -1.03
LMX1A-201ENST00000294816 TBL2Q9Y4P3 447 aaKnown RBP8.64□□□□□ -1.03
LMX1A-201ENST00000294816 LRRC30A6NM36 301 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms