RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ANKRD55Q3KP44 614 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 SIGIRRQ6IA17 410 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 MOB1BQ7L9L4 216 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 OR10P1Q8NGE3 313 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 MARVELD3Q96A59 401 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 PIMREGQ9BSJ6 248 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 C7orf69Q9H7B7 122 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 TUBA4BQ9H853 241 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 F8W036 122 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 GNG7O60262 68 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 CST7O76096 145 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 IGHV2-70P01814 119 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 NAT1P18440 290 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 ERP29P30040 261 aaKnown RBP7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 BLOC1S1P78537 153 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 C6orf201Q7Z4U5 140 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 OR8I2Q8N0Y5 310 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 RTN4IP1Q8WWV3 396 aaPredicted RBP7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 YIPF5Q969M3 257 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 MALSU1Q96EH3 234 aa7.04□□□□□ -1.28
PTPDC1-201ENST00000288976 IGHV3OR16-13A0A075B7E8 117 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 IGHV3-74A0A0B4J1X5 117 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 C17orf112F2Z3M2 114 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 F8VVB4 439 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 F8VWA3 439 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 OR2H2O95918 312 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 DAOP14920 347 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 MOGAT2Q3SYC2 334 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF880Q6PDB4 577 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 TRAT1Q6PIZ9 186 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 OR5D13Q8NGL4 314 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 ANGPTL6Q8NI99 470 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 SNX22Q96L94 193 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 LPAR3Q9UBY5 353 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 A0A1W2PP11 408 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 GPR31O00270 319 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 SSSCA1O60232 199 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 VSIG10L2P0DP72 767 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 LOXL3P58215 753 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 BTG1P62324 171 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 ZFP82Q8N141 532 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 SUMF2Q8NBJ7 301 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 MAPK1IP1LQ8NDC0 245 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 GPX8Q8TED1 209 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 MED30Q96HR3 178 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 P2RX4Q99571 388 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF665Q9H7R5 613 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 SOCS1O15524 211 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 FABP7O15540 132 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 ST8SIA3O43173 380 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 SMIM17P0DL12 118 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 TMEM50BP56557 158 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 TMEM33P57088 247 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 RPL7L1Q6DKI1 246 aaKnown RBP7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 DGAT2L7PQ6IED9 249 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 FAM216AQ8WUB2 273 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 OR2D2Q9H210 308 aa7.03□□□□□ -1.28
PTPDC1-201ENST00000288976 IGKV1D-17A0A075B6S4 117 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 TRAV24A0A0B4J272 114 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 UPK1BO75841 260 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 CYB5R3P00387 301 aaPredicted RBP7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 PSG2P11465 335 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 PRDX2P32119 198 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 ACTBL2Q562R1 376 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 OR4S1Q8NGB4 309 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 MARCH1Q8TCQ1 289 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 ARHGAP5-AS1Q96IT6 56 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 GAFA1Q96PS6 74 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 SDHCQ99643 169 aaPredicted RBP7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 SEC22CQ9BRL7 303 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 SAMD10Q9BYL1 202 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 OR6C3Q9NZP0 311 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 SLC25A10Q9UBX3 287 aaPredicted RBP7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 SIGLEC5O15389 551 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 COX7A2P2O60397 106 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 HRASP01112 189 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 ECI1P42126 302 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 PDLIM4P50479 330 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 PIGPP57054 158 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 AESQ08117 197 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 RBMS2Q15434 407 aaKnown RBP7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 GIMAP1Q8WWP7 306 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 FAM168AQ92567 244 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 TMEM56Q96MV1 263 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 VSIG4Q9Y279 399 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 NSG2Q9Y328 171 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 TIMM9Q9Y5J7 89 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 PRRC2CQ9Y520 2896 aaKnown RBP7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 LYNX1G3V0Z9 82 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 SNRNP70P08621 437 aaKnown RBP7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 LYNX1P0DP58 116 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 HRH1P35367 487 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 LYZP61626 148 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 TMEM30BQ3MIR4 351 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 SLC35E4Q6ICL7 350 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 ZNF497Q6ZNH5 498 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 C11orf42Q8N5U0 333 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 CD177Q8N6Q3 437 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 OR52I2Q8NH67 350 aa7.02□□□□□ -1.29
PTPDC1-201ENST00000288976 BLNKQ8WV28 456 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms