RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 KCNIP4Q6PIL6 250 aa11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 PPP1R35Q8TAP8 253 aa11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 RNF122Q9H9V4 155 aa11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 SEC14L6B5MCN3 397 aa11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 NTF3P20783 257 aa11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 MDH2P40926 338 aaKnown RBP11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 THBS3P49746 956 aa11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 CCL8P80075 99 aa11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 C20orf204Q6ZNR8 217 aa11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 C16orf82Q7Z2V1 217 aa11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 LYRM2Q9NU23 88 aaPredicted RBP11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 MPC1Q9Y5U8 109 aa11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 ATP23Q9Y6H3 246 aa11.66□□□□□ -0.54
LPCAT1-201ENST00000283415 TMEM30CPA0ZSE6 113 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 PLA2G5P39877 138 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 GFRA1P56159 465 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 RND1Q92730 232 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 RAB40CQ96S21 281 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 REPIN1Q9BWE0 567 aaKnown RBP11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 OR5B21A6NL26 309 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 PITX3O75364 302 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 IGHV3-48P01763 117 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 MPV17P39210 176 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 REG1BP48304 166 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 TCL1AP56279 114 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 ZNF90Q03938 601 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 RNFT1Q5M7Z0 435 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 ZNRF1Q8ND25 227 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 MRPL30Q8TCC3 161 aaKnown RBP11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 ACACBO00763 2458 aa11.65□□□□□ -0.54
LPCAT1-201ENST00000283415 SRP19P09132 144 aaKnown RBP11.65□□□□□ -0.55
LPCAT1-201ENST00000283415 ERVFRD-1P60508 538 aa11.65□□□□□ -0.55
LPCAT1-201ENST00000283415 ABHD5Q8WTS1 349 aa11.65□□□□□ -0.55
LPCAT1-201ENST00000283415 GINS3Q9BRX5 216 aa11.65□□□□□ -0.55
LPCAT1-201ENST00000283415 ACTR3CQ9C0K3 210 aaPredicted RBP11.65□□□□□ -0.55
LPCAT1-201ENST00000283415 DYNLRB1Q9NP97 96 aa11.65□□□□□ -0.55
LPCAT1-201ENST00000283415 C5orf52A6NGY3 159 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 H0Y8G0 127 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 WISP2O76076 250 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 BCL2P10415 239 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 COX5AP20674 150 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 KITLGP21583 273 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 KLF14Q8TD94 323 aaPredicted RBP11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 TMEM45BQ96B21 275 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 HIPK2Q9H2X6 1198 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 TRAV34A0A0B4J273 112 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 FOXO1Q12778 655 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 KHDC3LQ587J8 217 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 CDPF1Q6NVV7 123 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 PLPPR1Q8TBJ4 325 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 CCL17Q92583 94 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 C1QTNF5Q9BXJ0 243 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 FGF23Q9GZV9 251 aaPredicted RBP11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 MALRD1Q5VYJ5 2156 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 TRAV38-1A0A0B4J264 116 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 TRAV17A0A0B4J275 112 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 FOLR2P14207 255 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 WNT5AP41221 380 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 DBX2Q6ZNG2 339 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 OR5D13Q8NGL4 314 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 ZDHHC16Q969W1 377 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 ZDHHC11Q9H8X9 412 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
LPCAT1-201ENST00000283415 RNF212BA8MTL3 300 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 TOX4O94842 621 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 HBZP02008 142 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 COL10A1Q03692 680 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 FGFRL1Q8N441 504 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 OR10A7Q8NGE5 316 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 GATAD1Q8WUU5 269 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 METTL1Q9UBP6 276 aaKnown RBP11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 IGKV3D-15A0A087WSY6 115 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 PSG7Q13046 419 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 KDF1Q8NAX2 398 aaPredicted RBP11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 RIMS4Q9H426 269 aaPredicted RBP11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 BOD1L1Q8NFC6 3051 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 C21orf140B9A014 251 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 FTH1P19P0C7X4 201 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 SMIM21Q3B7S5 101 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 ODF3L1Q8IXM7 274 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 OR4D5Q8NGN0 318 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 POM121L2Q96KW2 1035 aa11.63□□□□□ -0.55
LPCAT1-201ENST00000283415 PGPEP1LA6NFU8 196 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 PLXNB1O43157 2135 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 OR7C2O60412 319 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 PRB4P10163 310 aaPredicted RBP11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 FOXF2Q12947 444 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 TOMM20LQ6UXN7 152 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 RCC1LQ96I51 464 aaKnown RBP11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 PRDM14Q9GZV8 571 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 TRAPPC1Q9Y5R8 145 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 A0A0G2JRQ6 117 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 ZG16O60844 167 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 CDX1P47902 265 aaPredicted RBP11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 PYY3Q5JQD4 70 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 PRR27Q6MZM9 219 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 FAM214BQ7L5A3 538 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 ATG101Q9BSB4 218 aa11.62□□□□□ -0.55
LPCAT1-201ENST00000283415 SPRR3Q9UBC9 169 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms