RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 RUNX1Q01196 453 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 DEFB110Q30KQ9 67 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 TMEM255AQ5JRV8 349 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 ZNF684Q5T5D7 378 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 STEAP4Q687X5 459 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 UFSP1Q6NVU6 142 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 PAMR1Q6UXH9 720 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 C18orf65Q6ZTR6 163 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 NEGR1Q7Z3B1 354 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 CALHM3Q86XJ0 350 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 MUC15Q8N387 334 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 ZNF439Q8NDP4 499 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 ST6GALNAC3Q8NDV1 305 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 FDCSPQ8NFU4 85 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 MFSD8Q8NHS3 518 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 IL22RA2Q969J5 263 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 EXOSC8Q96B26 276 aaKnown RBP3.55□□□□□ -1.84
CD44-202ENST00000278385 SEH1LQ96EE3 360 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 DIRAS2Q96HU8 199 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 HIST1H4GQ99525 98 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 C12orf57Q99622 126 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 RTBDNQ9BSG5 229 aaPredicted RBP3.55□□□□□ -1.84
CD44-202ENST00000278385 SUCNR1Q9BXA5 334 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 XCL2Q9UBD3 114 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 DHCR7Q9UBM7 475 aaKnown RBP3.55□□□□□ -1.84
CD44-202ENST00000278385 SS18L2Q9UHA2 77 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 JPT1Q9UK76 154 aa3.55□□□□□ -1.84
CD44-202ENST00000278385 PKD1L2Q7Z442 2459 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 WDR87Q6ZQQ6 2873 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 CEP295Q9C0D2 2601 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 IGLV3-12A0A075B6K2 115 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 IGHV4OR15-8A0A075B7B6 117 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 SAA2-SAA4A0A096LPE2 208 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 IGHV3OR16-9A0A0B4J2B5 98 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 IGHV3-38A0A0C4DH36 116 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 TEX50A0A1B0GTY4 177 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 RBFOX3A6NFN3 312 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 FAM220BPB1ANY3 271 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 H0YGG7 62 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 K7EM74 188 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 K7EQG2 157 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 SLC17A3O00476 420 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 FAAHO00519 579 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 SLC17A2O00624 439 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 FGF17O60258 216 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 RDH16O75452 317 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 CRLF1O75462 422 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 OR2J2O76002 312 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 C6orf47O95873 294 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 REG1AP05451 166 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 PRSS1P07477 247 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 CT45A10P0DMU9 189 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 OR5H8P0DN80 308 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 GPX2P18283 190 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 CXCL3P19876 107 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 HSPE1P61604 102 aaKnown RBP3.54□□□□□ -1.84
CD44-202ENST00000278385 PMVKQ15126 192 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 QPRTQ15274 297 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 IGFBP7Q16270 282 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 CCSMST1Q4G0I0 132 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 TCTEX1D4Q5JR98 221 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 FAM162BQ5T6X4 162 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 SAMD13Q5VXD3 122 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 UGT2A3Q6UWM9 527 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 IGFL3Q6UXB1 125 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 TCF24Q7RTU0 167 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 NAA40Q86UY6 237 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 UBAC2Q8NBM4 344 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 ZNF485Q8NCK3 441 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 OR2K2Q8NGT1 345 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 OR10D3Q8NH80 312 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 RGP1Q92546 391 aaPredicted RBP3.54□□□□□ -1.84
CD44-202ENST00000278385 L3HYPDHQ96EM0 354 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 CNRIP1Q96F85 164 aaPredicted RBP3.54□□□□□ -1.84
CD44-202ENST00000278385 MRPL48Q96GC5 212 aaKnown RBP3.54□□□□□ -1.84
CD44-202ENST00000278385 FMC1Q96HJ9 113 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 OR2A5Q96R48 311 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 C1QTNF4Q9BXJ3 329 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 SLIRPQ9GZT3 109 aaKnown RBP3.54□□□□□ -1.84
CD44-202ENST00000278385 CCDC90BQ9GZT6 254 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 GNB4Q9HAV0 340 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 TAC3Q9UHF0 121 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 PYCARDQ9ULZ3 195 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 ORC6Q9Y5N6 252 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 PTPRQQ9UMZ3 2332 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 FRYQ5TBA9 3013 aa3.54□□□□□ -1.84
CD44-202ENST00000278385 CELSR3Q9NYQ7 3312 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 IGKV1-8A0A0C4DH67 115 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 TEX48A0A1B0GUV7 120 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 A0A1B0GXF2 115 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 H0Y9J4 135 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 H7C417 338 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 DLEU1O43261 78 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 YIF1AO95070 293 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 PDYNP01213 254 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 TTRP02766 147 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 PFN1P07737 140 aaKnown RBP3.53□□□□□ -1.84
CD44-202ENST00000278385 BPGMP07738 259 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 HTR1AP08908 422 aa3.53□□□□□ -1.84
CD44-202ENST00000278385 FBP1P09467 338 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms