RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 FAM90A16PA6NEW6 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FAM90A20PA6NIJ5 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FAM90A8PA6NJQ4 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FAM90A7PA6NKC0 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FAM90A22PA8MWA6 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FAM90A12PA8MX19 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FAM90A5PA8MXJ8 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FAM90A23PA8MXZ1 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 LILRA1O75019 489 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 S1PR2O95136 353 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FAM90A15PP0C7V4 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FAM90A13PP0C7W8 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FAM90A14PP0C7W9 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FAM90A24PP0C7X0 464 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 FABP4P15090 132 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 HLA-GP17693 338 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 OPRK1P41145 380 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 DEFA6Q01524 100 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 Q6ZT83 130 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 MRGPRGQ86SM5 289 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 OR4S2Q8NH73 311 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 GALNT14Q96FL9 552 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 ABHD14AQ9BUJ0 271 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 A0A1W2PNU3 283 aaPredicted RBP12.17□□□□□ -0.46
TMEM47-201ENST00000275954 TMEM210A6NLX4 147 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 PITX3O75364 302 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 RAB5AP20339 215 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 UCNP55089 124 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 ZCCHC24Q8N2G6 241 aaKnown RBP12.17□□□□□ -0.46
TMEM47-201ENST00000275954 OR5D13Q8NGL4 314 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 BCL2L2Q92843 193 aaPredicted RBP12.17□□□□□ -0.46
TMEM47-201ENST00000275954 WDYHV1Q96HA8 205 aa12.17□□□□□ -0.46
TMEM47-201ENST00000275954 LYRM2Q9NU23 88 aaPredicted RBP12.17□□□□□ -0.46
TMEM47-201ENST00000275954 GAR1Q9NY12 217 aaKnown RBP12.17□□□□□ -0.46
TMEM47-201ENST00000275954 C16orf97H3BN30 126 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 ZG16O60844 167 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 P2RY6Q15077 328 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 SNRNP40Q96DI7 357 aaKnown RBP12.16□□□□□ -0.46
TMEM47-201ENST00000275954 PHOX2AO14813 284 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 PRB1P04280 392 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 OR10J4P0C629 311 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 GABRA6Q16445 453 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 BSXQ3C1V8 233 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 LINC00596Q86U02 117 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 UBTD1Q9HAC8 227 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 ODAMA1E959 279 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 AHRRA9YTQ3 701 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 SMPD2O60906 423 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 NBL1P41271 181 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 RND3P61587 244 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 RPL31P62899 125 aaKnown RBP12.16□□□□□ -0.46
TMEM47-201ENST00000275954 IGHV3-72A0A0B4J1Y9 119 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 C12orf77C9JDV5 145 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 NTF4P34130 210 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 UCP3P55916 312 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 FAM78BQ5VT40 261 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 C9orf106Q8NAJ2 232 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 RFNGQ9Y644 331 aa12.16□□□□□ -0.46
TMEM47-201ENST00000275954 TNRC18O15417 2968 aaPredicted RBP12.15□□□□□ -0.46
TMEM47-201ENST00000275954 PQLC2LA1A4F0 135 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 CYB5R3P00387 301 aaPredicted RBP12.15□□□□□ -0.46
TMEM47-201ENST00000275954 TDGF1P13385 188 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 RAB7AP51149 207 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 ERVFC1-1P60608 527 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 CMTM2Q8TAZ6 248 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 CORO2AQ92828 525 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 MISP3Q96FF7 219 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 TOLLIPQ9H0E2 274 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 RPRMQ9NS64 109 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 KIAA1456Q9P272 454 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 SPRR3Q9UBC9 169 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 FAM157AC9JC47 383 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 C11orf94C9JXX5 98 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 DANCRP0C864 163 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 GFRA1P56159 465 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 B3GALT5-AS1P59052 145 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 LHFPL1Q86WI0 220 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 PLPPR1Q8TBJ4 325 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 HS3ST6Q96QI5 342 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 PROK2Q9HC23 129 aa12.15□□□□□ -0.46
TMEM47-201ENST00000275954 CDK2AP1O14519 115 aa12.15□□□□□ -0.47
TMEM47-201ENST00000275954 MGST3O14880 152 aa12.15□□□□□ -0.47
TMEM47-201ENST00000275954 HIST3H3Q16695 136 aa12.15□□□□□ -0.47
TMEM47-201ENST00000275954 HFEQ30201 348 aa12.15□□□□□ -0.47
TMEM47-201ENST00000275954 SAXO1Q8IYX7 474 aa12.15□□□□□ -0.47
TMEM47-201ENST00000275954 RNF166Q96A37 237 aaPredicted RBP12.15□□□□□ -0.47
TMEM47-201ENST00000275954 TIMD4Q96H15 378 aa12.15□□□□□ -0.47
TMEM47-201ENST00000275954 RBKSQ9H477 322 aa12.15□□□□□ -0.47
TMEM47-201ENST00000275954 IGHV3-21A0A0B4J1V1 117 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 COX7A2P2O60397 106 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 ADH4P08319 380 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 TAS2R45P59539 299 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 UBE2G1P62253 170 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 RNFT1Q5M7Z0 435 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 MRPL30Q8TCC3 161 aaKnown RBP12.14□□□□□ -0.47
TMEM47-201ENST00000275954 NEIL1Q96FI4 390 aaPredicted RBP12.14□□□□□ -0.47
TMEM47-201ENST00000275954 HES4Q9HCC6 221 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 NUP210Q8TEM1 1887 aaPredicted RBP12.14□□□□□ -0.47
TMEM47-201ENST00000275954 G3V3Q6 166 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms