RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 GPR6P46095 362 aaPredicted RBP13.4□□□□□ -0.26
TPM1-201ENST00000267996 OR2B11Q5JQS5 317 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 CXorf66Q5JRM2 361 aaPredicted RBP13.4□□□□□ -0.26
TPM1-201ENST00000267996 SLC51BQ86UW2 128 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 LYG1Q8N1E2 194 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 ATG12O94817 140 aa13.39□□□□□ -0.27
TPM1-201ENST00000267996 CFDP00746 253 aaPredicted RBP13.39□□□□□ -0.27
TPM1-201ENST00000267996 HKR1P10072 659 aa13.39□□□□□ -0.27
TPM1-201ENST00000267996 NUP62P37198 522 aaPredicted RBP13.39□□□□□ -0.27
TPM1-201ENST00000267996 KIR2DS2P43631 304 aa13.39□□□□□ -0.27
TPM1-201ENST00000267996 THBS3P49746 956 aa13.39□□□□□ -0.27
TPM1-201ENST00000267996 AKR1C2P52895 323 aa13.39□□□□□ -0.27
TPM1-201ENST00000267996 ZNF816Q0VGE8 651 aaPredicted RBP13.39□□□□□ -0.27
TPM1-201ENST00000267996 ADTRPQ96IZ2 230 aa13.39□□□□□ -0.27
TPM1-201ENST00000267996 PLEKHA2Q9HB19 425 aa13.39□□□□□ -0.27
TPM1-201ENST00000267996 COA4Q9NYJ1 87 aa13.39□□□□□ -0.27
TPM1-201ENST00000267996 SESN1Q9Y6P5 492 aa13.39□□□□□ -0.27
TPM1-201ENST00000267996 A0A1W2PPH5 198 aa13.38□□□□□ -0.27
TPM1-201ENST00000267996 KANTRA0A1W2PQU2 76 aa13.38□□□□□ -0.27
TPM1-201ENST00000267996 IZUMO4Q1ZYL8 232 aa13.38□□□□□ -0.27
TPM1-201ENST00000267996 ZNF833PQ6ZTB9 187 aa13.38□□□□□ -0.27
TPM1-201ENST00000267996 RNASE11Q8TAA1 199 aaKnown RBP13.38□□□□□ -0.27
TPM1-201ENST00000267996 CACNG5Q9UF02 275 aa13.38□□□□□ -0.27
TPM1-201ENST00000267996 PRELID3BQ9Y3B1 194 aa13.38□□□□□ -0.27
TPM1-201ENST00000267996 PPIAL4CA0A0B4J2A2 164 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 C22orf46C9J442 243 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 J3QR06 171 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 HPRT1P00492 218 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 PPIAL4GP0DN37 164 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 MMP9P14780 707 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 EPHA1P21709 976 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 P2RY1P47900 373 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 ZNF137PP52743 207 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 POLR2GP62487 172 aaKnown RBP eCLIP13.37□□□□□ -0.27
TPM1-201ENST00000267996 ZNF383Q8NA42 475 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 S1PR3Q99500 378 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 ARPC5LQ9BPX5 153 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 TMEM133Q9H2Q1 129 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 ZNRD1Q9P1U0 126 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 LRRK2Q5S007 2527 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 FCGR3BO75015 233 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 KRASP01116 189 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 IFNA7P01567 189 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 RPL12P30050 165 aaKnown RBP13.37□□□□□ -0.27
TPM1-201ENST00000267996 G6PCP35575 357 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 GNB2P62879 340 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 MIDNQ504T8 468 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 FAM71F2Q6NXP2 309 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 OR9G1Q8NH87 305 aa13.37□□□□□ -0.27
TPM1-201ENST00000267996 SSBP3Q9BWW4 388 aaPredicted RBP13.37□□□□□ -0.27
TPM1-201ENST00000267996 FAM208BQ5VWN6 2430 aa13.36□□□□□ -0.27
TPM1-201ENST00000267996 IGHV4-39P01824 125 aa13.36□□□□□ -0.27
TPM1-201ENST00000267996 LIPFP07098 398 aa13.36□□□□□ -0.27
TPM1-201ENST00000267996 CT45A6P0DMU7 189 aa13.36□□□□□ -0.27
TPM1-201ENST00000267996 CT45A5P0DMU8 189 aa13.36□□□□□ -0.27
TPM1-201ENST00000267996 CT45A7P0DMV0 189 aa13.36□□□□□ -0.27
TPM1-201ENST00000267996 EXOSC2Q13868 293 aaKnown RBP13.36□□□□□ -0.27
TPM1-201ENST00000267996 GPR157Q5UAW9 335 aa13.36□□□□□ -0.27
TPM1-201ENST00000267996 ST6GALNAC6Q969X2 333 aa13.36□□□□□ -0.27
TPM1-201ENST00000267996 CYTL1Q9NRR1 136 aa13.36□□□□□ -0.27
TPM1-201ENST00000267996 FAM90A26D6RGX4 464 aa13.35□□□□□ -0.27
TPM1-201ENST00000267996 TOR1AO14656 332 aa13.35□□□□□ -0.27
TPM1-201ENST00000267996 GPR137BO60478 399 aa13.35□□□□□ -0.27
TPM1-201ENST00000267996 UBA52P62987 128 aaKnown RBP13.35□□□□□ -0.27
TPM1-201ENST00000267996 ABHD12Q8N2K0 398 aa13.35□□□□□ -0.27
TPM1-201ENST00000267996 ZNF525Q8N782 197 aa13.35□□□□□ -0.27
TPM1-201ENST00000267996 OR4S2Q8NH73 311 aa13.35□□□□□ -0.27
TPM1-201ENST00000267996 TNFRSF14Q92956 283 aa13.35□□□□□ -0.27
TPM1-201ENST00000267996 R3HDM4Q96D70 268 aa13.35□□□□□ -0.27
TPM1-201ENST00000267996 CCL19Q99731 98 aa13.35□□□□□ -0.27
TPM1-201ENST00000267996 LOC105371242A0A075B767 164 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 MARCH11A6NNE9 402 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 FAM90A9PA6NNJ1 464 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 TMEM50AO95807 157 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 IGHV2-5P01817 119 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 PVALBP20472 110 aaPredicted RBP13.34□□□□□ -0.27
TPM1-201ENST00000267996 SP5Q6BEB4 398 aaPredicted RBP13.34□□□□□ -0.27
TPM1-201ENST00000267996 STOML3Q8TAV4 291 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 ST8SIA2Q92186 375 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 TMEM186Q96B77 213 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 MAGT1Q9H0U3 335 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 CHD6Q8TD26 2715 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 hCG_1809904A0A1W2PP81 198 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 A0A1W2PPE2 198 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 A0A1W2PR64 198 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 A0A1W2PRV1 198 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 TAAR5O14804 337 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 CHST1O43916 411 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 SSSCA1O60232 199 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 COX6B1P14854 86 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 ARHGDIBP52566 201 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 PAX9P55771 341 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 NDUFA5Q16718 116 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 AARDQ4LEZ3 155 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 H2BFWTQ7Z2G1 175 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 ZNF295-AS1Q8N0V1 137 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 ZNF471Q9BX82 626 aaPredicted RBP13.34□□□□□ -0.27
TPM1-201ENST00000267996 NARFLQ9H6Q4 476 aa13.34□□□□□ -0.27
TPM1-201ENST00000267996 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.34□□□□□ -0.27
TPM1-201ENST00000267996 UBQLN2Q9UHD9 624 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms