RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 KIAA1324LA8MWY0 1029 aaPredicted RBP13.15□□□□□ -0.3
TIMP3-201ENST00000266085 WNT9BO14905 357 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 MPDU1O75352 247 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 CAMPP49913 170 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 UCP3P55916 312 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 ABLIM2Q6H8Q1 611 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 ASPHD2Q6ICH7 369 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 MMD2Q8IY49 270 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 H1FOOQ8IZA3 346 aaPredicted RBP13.15□□□□□ -0.3
TIMP3-201ENST00000266085 REPIN1Q9BWE0 567 aaKnown RBP13.15□□□□□ -0.3
TIMP3-201ENST00000266085 TOLLIPQ9H0E2 274 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 SMPD2O60906 423 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 CD40P25942 277 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 GPR146Q96CH1 333 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 C12orf57Q99622 126 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 SDHCQ99643 169 aaPredicted RBP13.15□□□□□ -0.3
TIMP3-201ENST00000266085 C1QTNF5Q9BXJ0 243 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 WASHC3Q9Y3C0 194 aa13.15□□□□□ -0.3
TIMP3-201ENST00000266085 SULT1A2P50226 295 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 ISOC2Q96AB3 205 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 FOXD3Q9UJU5 478 aaPredicted RBP13.14□□□□□ -0.31
TIMP3-201ENST00000266085 B4DEV8 164 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 EFNA2O43921 213 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 NMBP08949 121 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 PSG7Q13046 419 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 KHDC3LQ587J8 217 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 CALHM1Q8IU99 346 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 ZNRF1Q8ND25 227 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 FAM222BQ8WU58 562 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 FAM90A26D6RGX4 464 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 PHOX2AO14813 284 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 PDE6DO43924 150 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 PMCHP20382 165 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 ARF6P62330 175 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 RPEL1Q2QD12 228 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 RSG1Q9BU20 258 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 TMPRSS5Q9H3S3 457 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 TUBD1Q9UJT1 453 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 MARCH11A6NNE9 402 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 ZNF660Q6AZW8 331 aaPredicted RBP13.14□□□□□ -0.31
TIMP3-201ENST00000266085 LEAP2Q969E1 77 aa13.14□□□□□ -0.31
TIMP3-201ENST00000266085 IGHV1-69-2A0A0G2JMI3 117 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 B9A039 149 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 FAM74A3Q4VXF1 159 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 DPPA3Q6W0C5 159 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 SPACA3Q8IXA5 215 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 SEMA5BQ9P283 1151 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 IGHV3-21A0A0B4J1V1 117 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 HELTA6NFD8 242 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 ZNF729A6NN14 1252 aaPredicted RBP13.13□□□□□ -0.31
TIMP3-201ENST00000266085 RHBDL1O75783 438 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 MELTFP08582 738 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 HTR1DP28221 377 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 CLEC5AQ9NY25 188 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 ARL2-SNX15V9GYD0 113 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 ZNF716A6NP11 495 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 CELA3BP08861 270 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 DLK1P80370 383 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 WDR73Q6P4I2 378 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 KLHDC3Q9BQ90 382 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 SMDT1Q9H4I9 107 aa13.13□□□□□ -0.31
TIMP3-201ENST00000266085 PPIAL4CA0A0B4J2A2 164 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 H3BQ15 152 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 PPIAL4GP0DN37 164 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 MUC1P15941 1255 aaPredicted RBP13.12□□□□□ -0.31
TIMP3-201ENST00000266085 ATP5J2P56134 94 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 SLC35E4Q6ICL7 350 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 OR9G1Q8NH87 305 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 MEGF10Q96KG7 1140 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 AQP10Q96PS8 301 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 TMEM208Q9BTX3 173 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 TM2D1Q9BX74 207 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 PLXNA3P51805 1871 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 IGHV2OR16-5A0A0B4J2B6 119 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 MMP7P09237 267 aaPredicted RBP13.12□□□□□ -0.31
TIMP3-201ENST00000266085 PGA5P0DJD9 388 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 COL8A1P27658 744 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 SSTR5P35346 364 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 SNRPEP62304 92 aaKnown RBP13.12□□□□□ -0.31
TIMP3-201ENST00000266085 SELENOTP62341 195 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 TMEM30BQ3MIR4 351 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 FAM209AQ5JX71 171 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 ZNF818PQ6ZRF7 136 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 CBLN2Q8IUK8 224 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 SELENOHQ8IZQ5 122 aaKnown RBP13.12□□□□□ -0.31
TIMP3-201ENST00000266085 ANAPC16Q96DE5 110 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 TMEM140Q9NV12 185 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 CEACAM18A8MTB9 384 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 C1QL1O75973 258 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 OR10J1P30954 320 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 HSPE1P61604 102 aaKnown RBP13.12□□□□□ -0.31
TIMP3-201ENST00000266085 SUMO1P63165 101 aaKnown RBP13.12□□□□□ -0.31
TIMP3-201ENST00000266085 BMPERQ8N8U9 685 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 SIRT7Q9NRC8 400 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 PXMP4Q9Y6I8 212 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 CORTO00230 105 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 SLC25A17O43808 307 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 FCER1GP30273 86 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 APOBEC3AP31941 199 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms