RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 ZNF562Q6V9R5 426 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 ST20Q9HBF5 79 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 ZNF205O95201 554 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 MPLP40238 635 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 GZMMP51124 257 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 HSD52Q0P140 79 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 PRDX4Q13162 271 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 OR4P4Q8NGL7 312 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 VSTM2AQ8TAG5 236 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 SLC25A28Q96A46 364 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 THYN1Q9P016 225 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 H3BP45 60 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 PSMB2P49721 201 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 PPP2CBP62714 309 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 PPP2CAP67775 309 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 ZNF117Q03924 483 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 SLC36A1Q7Z2H8 476 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 ATG4DQ86TL0 474 aaPredicted RBP4.98□□□□□ -1.61
VCAN-201ENST00000265077 C6orf106Q9H6K1 298 aaPredicted RBP4.98□□□□□ -1.61
VCAN-201ENST00000265077 ATP23Q9Y6H3 246 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 NCBP2LA6PVI3 153 aaKnown RBP4.98□□□□□ -1.61
VCAN-201ENST00000265077 CTSVO60911 334 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 METAP1P53582 386 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 ADAD2Q8NCV1 583 aaKnown RBP4.98□□□□□ -1.61
VCAN-201ENST00000265077 YAE1D1Q9NRH1 226 aa4.98□□□□□ -1.61
VCAN-201ENST00000265077 FSTP19883 344 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 RPS20P60866 119 aaKnown RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 TMEM95Q3KNT9 176 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 KISS1RQ969F8 398 aaPredicted RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 WSB2Q9NYS7 404 aaPredicted RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 A0A1W2PQD3 144 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 RER1O15258 196 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 FAM157BP0CG42 384 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 OR4C3Q8NH37 302 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 PRSS3P2Q8NHM4 247 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 VSTM2LQ96N03 204 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 NRN1Q9NPD7 142 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 ZFHX2Q9C0A1 2572 aaPredicted RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 SPTY2D1-AS1A0A0U1RR47 76 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 IGSF23A1L1A6 192 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 GPR183P32249 361 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 GAGE2BQ13066 116 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 GAGE2EQ4V326 116 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 RNFT1Q5M7Z0 435 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 GAGE2DQ9UEU5 116 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 FOXD3Q9UJU5 478 aaPredicted RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 ANKRD11Q6UB99 2663 aaPredicted RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 PPIAL4DF5H284 164 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 ORM1P02763 201 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 GFERP55789 205 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 ZNF788Q6ZQV5 615 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 BIVMQ86UB2 503 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 TRBV24-1A0A075B6N3 115 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 OOEPA6NGQ2 149 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 F8VVB4 439 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 F8VWA3 439 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 APOMO95445 188 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 SPINK8P0C7L1 97 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 CEACAM6P40199 344 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 HERVK_113P61574 105 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 PDPNQ86YL7 162 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 OR1L4Q8NGR5 311 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 TMEM70Q9BUB7 260 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 MRPS16Q9Y3D3 137 aaKnown RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 KBTBD11O94819 623 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 S100A4P26447 101 aaKnown RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 PPP1CCP36873 323 aaKnown RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 ACSF3Q4G176 576 aaPredicted RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 ASCL4Q6XD76 172 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 COX14Q96I36 57 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 TXNDC17Q9BRA2 123 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 KIAA1549LQ6ZVL6 1849 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 WISP3O95389 354 aaPredicted RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 LPAL2Q16609 132 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 KRTCAP3Q53RY4 240 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 FER1L6-AS1Q8NA97 138 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 OR8B12Q8NGG6 310 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 SLC52A3Q9NQ40 469 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 PRR13Q9NZ81 148 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 IL36GQ9NZH8 169 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 LRRK2Q5S007 2527 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 TMEM250H0YL14 139 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 K7EP13 123 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 AMY1AP04745 511 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 IFI6P09912 130 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 OTX1P32242 354 aaPredicted RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 DOLPP1Q86YN1 238 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 GVQW1Q8N7I0 195 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 PATE1Q8WXA2 126 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 C8orf44Q96CB5 159 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 SF3B5Q9BWJ5 86 aaKnown RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 ICAM5Q9UMF0 924 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 TRAV14DV4A0A0A6YYC5 116 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 FAM87AP0C7U9 286 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 NMUP48645 174 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 RIGQ13278 110 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 FAM219BQ5XKK7 198 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 TET2Q6N021 2002 aaPredicted RBP4.97□□□□□ -1.61
VCAN-201ENST00000265077 TNFSF14O43557 240 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 ZIC1Q15915 447 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms