RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 FAM169BQ8N8A8 192 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 RABAC1Q9UI14 185 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 KBTBD11O94819 623 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 CD74P04233 296 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 NGFRP08138 427 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 FOLR2P14207 255 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 SCNM1Q9BWG6 230 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 MAP1LC3AQ9H492 121 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 FRMPD3Q5JV73 1810 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 ZNF250P15622 560 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 C16orf92Q96LL3 132 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 PHLDA3Q9Y5J5 127 aa15.16■□□□□ 0.02
NOTCH3-201ENST00000263388 J3KRW8 73 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 ZNF137PP52743 207 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 HSPB9Q9BQS6 159 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 CRISPLD2Q9H0B8 497 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 TICRRQ7Z2Z1 1910 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 AMY1AP04745 511 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 EFNB2P52799 333 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 OR10AG1Q8NH19 301 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 TMEM189A5PLL7 270 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 RLFQ13129 1914 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 TRBV9A0A0B4J1U6 114 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 ASAH2BP0C7U1 165 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 TM4SF20Q53R12 229 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 A0A1W2PPC1 479 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 A0A1W2PS18 150 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 KCNAB3O43448 404 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 AGFG2O95081 481 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 SFTPCP11686 197 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 NPBWR2P48146 333 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 NANOS3P60323 173 aaKnown RBP15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 EBLN2Q6P2I7 272 aa15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 MBD1Q9UIS9 605 aaPredicted RBP15.15■□□□□ 0.02
NOTCH3-201ENST00000263388 PPP1R17O96001 155 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 IL4P05112 153 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 IL36RNQ9UBH0 155 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 SLC25A34Q6PIV7 304 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 TNFRSF19Q9NS68 423 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 LEPROTL1O95214 131 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 PRR7Q8TB68 274 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 HDHD3Q9BSH5 251 aaPredicted RBP15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 PPP1R3EQ9H7J1 279 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 AURKAIP1Q9NWT8 199 aaPredicted RBP15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 ZNF98A6NK75 572 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM106CPP0CH98 169 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 TNFSF10P50591 281 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 NUDT10Q8NFP7 164 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 NUDT11Q96G61 164 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 MS4A7Q9GZW8 240 aaPredicted RBP15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 WNT9BO14905 357 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 S1PR2O95136 353 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 RPS20P60866 119 aaKnown RBP15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 NLRC5Q86WI3 1866 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 CLDN14O95500 239 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 PRELID3AQ96N28 172 aa15.14■□□□□ 0.01
NOTCH3-201ENST00000263388 FREM1Q5H8C1 2179 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 TUBD1Q9UJT1 453 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 NDUFB4O95168 129 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 PLXNA3P51805 1871 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 HOXD4P09016 255 aaPredicted RBP15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 PQLC2Q6ZP29 291 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 GALNT14Q96FL9 552 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 ZDHHC8Q9ULC8 765 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 CXCL2P19875 107 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 RPL8P62917 257 aaKnown RBP15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 MARS2Q96GW9 593 aaKnown RBP15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 WIPI2Q9Y4P8 454 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A26D6RGX4 464 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 C3AR1Q16581 482 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 P2RY6Q15077 328 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 SMIM13P0DJ93 91 aa15.13■□□□□ 0.01
NOTCH3-201ENST00000263388 KIF26AQ9ULI4 1882 aaPredicted RBP15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 IFNL4K9M1U5 179 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 HLA-DRB1P01911 266 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 DDTP30046 118 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 ID4P47928 161 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 GZMMP51124 257 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 NRIP2Q9BQI9 281 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 MRPL16Q9NX20 251 aaKnown RBP15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 PTP4A3O75365 173 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 DXOO77932 396 aaKnown RBP15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 LIMS1P48059 325 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 HINT1P49773 126 aaPredicted RBP15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 THSD7AQ9UPZ6 1657 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 C10orf111Q8N326 155 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 HSPB7Q9UBY9 170 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 PLXNA2O75051 1894 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 WDR25Q64LD2 544 aaPredicted RBP15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 AQP10Q96PS8 301 aa15.12■□□□□ 0.01
NOTCH3-201ENST00000263388 CFDP00746 253 aaPredicted RBP15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 DLX6P56179 175 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 SLC35B1P78383 322 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 C19orf24Q9BVV8 132 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 PEF1Q9UBV8 284 aaKnown RBP15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 TCF24Q7RTU0 167 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 TMEM45BQ96B21 275 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A10PA6NDY2 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A18PA6NE21 464 aa15.11■□□□□ 0.01
NOTCH3-201ENST00000263388 FAM90A16PA6NEW6 464 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms