RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ANKRD30BLA7E2S9 258 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 S1PR2O95136 353 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 CELA3AP09093 270 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 IRF2P14316 349 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 CBLN1P23435 193 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 SRD5A2P31213 254 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 RPL30P62888 115 aaKnown RBP13.4□□□□□ -0.26
LMNB1-201ENST00000261366 NPCDR1Q9BY65 106 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 U3KQA8 63 aa13.4□□□□□ -0.26
LMNB1-201ENST00000261366 ODAMA1E959 279 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 RBFOX2O43251 390 aaKnown RBP eCLIP13.39□□□□□ -0.276e-10■■■■□ 19.3
LMNB1-201ENST00000261366 SPINK4O60575 86 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 CFIP05156 583 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 SLC25A6P12236 298 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 TFPI2P48307 235 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 C3AR1Q16581 482 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 TMEM14EPQ6UXP3 125 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 MAFAQ8NHW3 353 aaPredicted RBP13.39□□□□□ -0.27
LMNB1-201ENST00000261366 SAP25Q8TEE9 199 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 FAM103A1Q9BTL3 118 aaKnown RBP13.39□□□□□ -0.27
LMNB1-201ENST00000261366 TMEM208Q9BTX3 173 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 ZDHHC11Q9H8X9 412 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 CDC34P49427 236 aaPredicted RBP13.39□□□□□ -0.27
LMNB1-201ENST00000261366 LTC4SQ16873 150 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 C1orf194Q5T5A4 169 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 SPINK14Q6IE38 97 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 COLCA1Q6ZS62 124 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 CXorf67Q86X51 503 aaPredicted RBP13.39□□□□□ -0.27
LMNB1-201ENST00000261366 AGBL5Q8NDL9 886 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 CMTM2Q8TAZ6 248 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 VN1R17PQ8TDU5 208 aa13.39□□□□□ -0.27
LMNB1-201ENST00000261366 TOX3O15405 576 aaPredicted RBP13.38□□□□□ -0.27
LMNB1-201ENST00000261366 OR2H2O95918 312 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 FRMD6-AS1P0C7T7 363 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 CDKN1AP38936 164 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 NUFIP2Q7Z417 695 aaKnown RBP13.38□□□□□ -0.27
LMNB1-201ENST00000261366 DTD1Q8TEA8 209 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 APOBEC3DQ96AK3 386 aaPredicted RBP13.38□□□□□ -0.27
LMNB1-201ENST00000261366 RBM14Q96PK6 669 aaKnown RBP13.38□□□□□ -0.27
LMNB1-201ENST00000261366 DUSP23Q9BVJ7 150 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 TMEM147Q9BVK8 224 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 RIMS4Q9H426 269 aaPredicted RBP13.38□□□□□ -0.27
LMNB1-201ENST00000261366 PPIAL4AQ9Y536 164 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 ZDBF2Q9HCK1 2354 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 IGHV3-43A0A0B4J1X8 118 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 DEFB108AA8MXU0 73 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 SLC17A3O00476 420 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 IGHV3-43DP0DP04 118 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 OR3A1P47881 315 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 TPRX1Q8N7U7 411 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 F2Z2F3 143 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 SRP14P37108 136 aaKnown RBP13.38□□□□□ -0.27
LMNB1-201ENST00000261366 RIPPLY2Q5TAB7 128 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 OR52L2PQ8NGH6 319 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 FAM234AQ9H0X4 552 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 C12orf49Q9H741 205 aa13.38□□□□□ -0.27
LMNB1-201ENST00000261366 ZFHX4Q86UP3 3567 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 C17orf98A8MV24 154 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 PATE3B3GLJ2 98 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 SERPINA7P05543 415 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 OR10J1P30954 320 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 RPL15P61313 204 aaKnown RBP13.37□□□□□ -0.27
LMNB1-201ENST00000261366 SRSF7Q16629 238 aaKnown RBP eCLIP13.37□□□□□ -0.27
LMNB1-201ENST00000261366 HSPB9Q9BQS6 159 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 GOLT1BQ9Y3E0 138 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 A0A1B0GWJ7 208 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 CDIPTO14735 213 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 GRPP07492 148 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 RAB4AP20338 218 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 GNG3P63215 75 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 Q6ZWC4 215 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 CENPVQ7Z7K6 275 aaPredicted RBP13.37□□□□□ -0.27
LMNB1-201ENST00000261366 ZNF573Q86YE8 665 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 WDYHV1Q96HA8 205 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 DIRC2Q96SL1 478 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 SH2D2AQ9NP31 389 aa13.37□□□□□ -0.27
LMNB1-201ENST00000261366 RYDENQ9NUL5 291 aaKnown RBP13.37□□□□□ -0.27
LMNB1-201ENST00000261366 LOC102723996A0A087X1L8 192 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 A0A1W2PPV4 95 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 FAM166BA8MTA8 275 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 IGHV3-13P01766 116 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 IGHV3-7P01780 117 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 SAXO1Q8IYX7 474 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 RFESDQ8TAC1 157 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 KCNE4Q8WWG9 221 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 HES7Q9BYE0 225 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 PILRBQ9UKJ0 227 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 TRBV20OR9-2A0A075B6H5 130 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 SYNGR4O95473 234 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 ZCCHC14Q8WYQ9 949 aaKnown RBP13.36□□□□□ -0.27
LMNB1-201ENST00000261366 PXMP4Q9Y6I8 212 aa13.36□□□□□ -0.27
LMNB1-201ENST00000261366 MDFIC2A0A1B0GVS7 189 aa13.35□□□□□ -0.27
LMNB1-201ENST00000261366 LRRC30A6NM36 301 aa13.35□□□□□ -0.27
LMNB1-201ENST00000261366 F6UZH7 168 aa13.35□□□□□ -0.27
LMNB1-201ENST00000261366 NXPH2O95156 264 aa13.35□□□□□ -0.27
LMNB1-201ENST00000261366 RPLP1P05386 114 aaKnown RBP13.35□□□□□ -0.27
LMNB1-201ENST00000261366 KITLGP21583 273 aa13.35□□□□□ -0.27
LMNB1-201ENST00000261366 PMS2CLQ68D20 193 aa13.35□□□□□ -0.27
LMNB1-201ENST00000261366 IFI44Q8TCB0 444 aa13.35□□□□□ -0.27
LMNB1-201ENST00000261366 C5orf30Q96GV9 206 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms