RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 FAM206AQ9NX38 181 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 ZDHHC8Q9ULC8 765 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 KIF13BQ9NQT8 1826 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 KBTBD11O94819 623 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 IFITM3Q01628 133 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 HERPUD1Q15011 391 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 TMEM252Q8N6L7 170 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 SYT8Q8NBV8 401 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 FAM181BA6NEQ2 426 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 S1PR2O95136 353 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 TIAF1O95411 115 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 UBE2V2Q15819 145 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 CALHM1Q8IU99 346 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 DUX5Q96PT3 197 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 ATG101Q9BSB4 218 aa10.39□□□□□ -0.75
COL8A1-201ENST00000261037 PRR19A6NJB7 356 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 ERGP11308 486 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 NPBWR2P48146 333 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 PRSS8Q16651 343 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 VAX1Q5SQQ9 334 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 SHISA5Q8N114 240 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 ABHD12Q8N2K0 398 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 NEU1Q99519 415 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 IGKV3-20P01619 116 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 THY1P04216 161 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 GLIPR1P48060 266 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 P2RY4P51582 365 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 WDR25Q64LD2 544 aaPredicted RBP10.38□□□□□ -0.75
COL8A1-201ENST00000261037 FGFRL1Q8N441 504 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 TRPM6Q9BX84 2022 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 TGIF2-C20orf24A0A0A6YYL0 155 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 IGHV3-35A0A0C4DH35 117 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 LINC00862A6NCI5 91 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 GCM2O75603 506 aaPredicted RBP10.38□□□□□ -0.75
COL8A1-201ENST00000261037 MIEN1Q9BRT3 115 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 A0A1W2PQM1 296 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 FAM74A7A6NL05 159 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 HSPB1P04792 205 aaKnown RBP10.38□□□□□ -0.75
COL8A1-201ENST00000261037 ARL14EPLP0DKL9 152 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 CD99P14209 185 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 CKS2P33552 79 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 DNLZQ5SXM8 178 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 AQP3Q92482 292 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.38□□□□□ -0.75
COL8A1-201ENST00000261037 IGHV3-66A0A0C4DH42 116 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 MC5RP33032 325 aa10.38□□□□□ -0.75
COL8A1-201ENST00000261037 GREB1LQ9C091 1923 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-201ENST00000261037 ODAMA1E959 279 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 CX3CL1P78423 397 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 ATP5G2Q06055 141 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 PNKDQ8N490 385 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 RAB24Q969Q5 203 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 HSPB9Q9BQS6 159 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 ZNF430Q9H8G1 570 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-201ENST00000261037 PITPNC1Q9UKF7 332 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 LOC105371242A0A075B767 164 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 NUDT3O95989 172 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 ATP5J2P56134 94 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 ADIPOQQ15848 244 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 ZNF818PQ6ZRF7 136 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 WNT5BQ9H1J7 359 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 MIOXQ9UGB7 285 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 S4R3C0 116 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 TMEM56-RWDD3S4R434 201 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 CRYBA2P53672 197 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 PCOLCEQ15113 449 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 GREM1O60565 184 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 GFRA3O60609 400 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 STARD6P59095 220 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 RNF115Q9Y4L5 304 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 PARP14Q460N5 1801 aa10.37□□□□□ -0.75
COL8A1-201ENST00000261037 TDRD15B5MCY1 1934 aaKnown RBP10.37□□□□□ -0.75
COL8A1-201ENST00000261037 TRGC2P03986 189 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 SPATA45Q537H7 98 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 QTRT1Q9BXR0 403 aaKnown RBP10.36□□□□□ -0.75
COL8A1-201ENST00000261037 KLK15Q9H2R5 256 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 G6PC2Q9NQR9 355 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 GPR132Q9UNW8 380 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 KNL1Q8NG31 2342 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 A0A1W2PS18 150 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 CD1AP06126 327 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 ANOS1P23352 680 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 SLC25A38Q96DW6 304 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 PPP1R3EQ9H7J1 279 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 RGPD3A6NKT7 1758 aaPredicted RBP10.36□□□□□ -0.75
COL8A1-201ENST00000261037 IGKV1D-42A0A075B6H8 117 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 IGHV3OR16-13A0A075B7E8 117 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 IGHV3-74A0A0B4J1X5 117 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 FAM74A4Q5TZK3 123 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 C1orf174Q8IYL3 243 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 DCTN5Q9BTE1 182 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 HOXD4P09016 255 aaPredicted RBP10.36□□□□□ -0.75
COL8A1-201ENST00000261037 PKIAP61925 76 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 TMEM177Q53S58 311 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 DDB2Q92466 427 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 TAF15Q92804 592 aaKnown RBP eCLIP10.36□□□□□ -0.75
COL8A1-201ENST00000261037 NRIP2Q9BQI9 281 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 WNT9BO14905 357 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 MFAP4P55083 255 aa10.36□□□□□ -0.75
COL8A1-201ENST00000261037 C21orf62-AS1Q17RA5 79 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms