RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ADAD2Q8NCV1 583 aaKnown RBP5.84□□□□□ -1.48
PDGFRA-201ENST00000257290 MRPL27Q9P0M9 148 aaKnown RBP5.84□□□□□ -1.48
PDGFRA-201ENST00000257290 LRRC30A6NM36 301 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 C3orf79P0CE67 100 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 IL3RAP26951 378 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 C2orf68Q2NKX9 166 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 MRGPREQ86SM8 312 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 FAM19A2Q8N3H0 131 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 FGF13Q92913 245 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 RBM24Q9BX46 236 aaKnown RBP5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 MRPS18AQ9NVS2 196 aaKnown RBP5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 ANKRD10Q9NXR5 420 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 HCFC2Q9Y5Z7 792 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 TMEM50AO95807 157 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 MAGEA5P43359 124 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 DLX2Q07687 328 aaPredicted RBP5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 KIAA1644Q3SXP7 199 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 FAM78AQ5JUQ0 283 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 DOK3Q7L591 496 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 DNAJC30Q96LL9 226 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 PRADC1Q9BSG0 188 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 PLAGL1Q9UM63 463 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 TMSB15BA0A087X1C1 80 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 CXorf51AA0A1B0GTR3 108 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 NPPBP16860 134 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 RHOGP84095 191 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 COA6Q5JTJ3 125 aaKnown RBP5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 SLC35E4Q6ICL7 350 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 ZDHHC16Q969W1 377 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 UCN2Q96RP3 112 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 HSD17B10Q99714 261 aaKnown RBP5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 TMEM204Q9BSN7 226 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 MRPL20Q9BYC9 149 aaKnown RBP5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 AURKAIP1Q9NWT8 199 aaPredicted RBP5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 CDC42EP2O14613 210 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 CTXN1P60606 82 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 PCBD1P61457 104 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 C3AR1Q16581 482 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 ZNF502Q8TBZ5 544 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 MRPL24Q96A35 216 aaKnown RBP5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 RPEQ96AT9 228 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 TNFRSF12AQ9NP84 129 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 CENPVL1A0A0U1RR11 272 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 CENPVL3A0A0U1RRI6 287 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 C21orf140B9A014 251 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 PRSS56P0CW18 603 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 DMKNQ6E0U4 476 aaPredicted RBP5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 RSPO2Q6UXX9 243 aaPredicted RBP5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 OR4C3Q8NH37 302 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 PELI1Q96FA3 418 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 TRAV27A0A087WT01 109 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 LOC102725191A0A1B0GVB3 256 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 TIAF1O95411 115 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 MFAP2P55001 183 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 ICAM4Q14773 271 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 HSD11B1LQ7Z5J1 315 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 MMD2Q8IY49 270 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 CLDND2Q8NHS1 167 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 DIO2Q92813 273 aa5.83□□□□□ -1.48
PDGFRA-201ENST00000257290 LYSMD4Q5XG99 296 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 ACSM6Q6P461 480 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 INO80CQ6PI98 192 aaPredicted RBP5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 LRRC75A-AS1Q8N1F1 130 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 C10orf111Q8N326 155 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 OR51G1Q8NGK1 321 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 CSDC2Q9Y534 153 aaKnown RBP5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 GPX1P07203 203 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 DUSP5Q16690 384 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 CD300LDQ6UXZ3 194 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 ARHGEF39Q8N4T4 335 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 OLIG1Q8TAK6 271 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 RETNQ9HD89 108 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 PNRC2Q9NPJ4 139 aaKnown RBP5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 AP5S1Q9NUS5 200 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 WSB2Q9NYS7 404 aaPredicted RBP5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 PLXNB2O15031 1838 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 F8WDY8 70 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 ZNF688P0C7X2 276 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 FAM157CP0CG43 387 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 TFPIP10646 304 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 ERVK-16P61578 105 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 RPS15AP62244 130 aaKnown RBP5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 FOXL1Q12952 345 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 FAM57BQ71RH2 274 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 H1FNTQ75WM6 255 aaPredicted RBP5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 RPS4Y2Q8TD47 263 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 NUDT8Q8WV74 236 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 IL36BQ9NZH7 164 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 IL36GQ9NZH8 169 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 SF3B6Q9Y3B4 125 aaKnown RBP5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 TMEM272A0A1B0GTI8 110 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 F2RL2O00254 374 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 MOSP00540 346 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 SLC38A11Q08AI6 406 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 ZNF816Q0VGE8 651 aaPredicted RBP5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 PRDX4Q13162 271 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 TMEM116Q8NCL8 245 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 NUP43Q8NFH3 380 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 TAS2R4Q9NYW5 299 aa5.82□□□□□ -1.48
PDGFRA-201ENST00000257290 ICAM5Q9UMF0 924 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms