RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 SLC35E1Q96K37 410 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 EML6Q6ZMW3 1958 aa12.05□□□□□ -0.48
SHPK-201ENST00000225519 C5orf49A4QMS7 147 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 PMCHP20382 165 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 G6PCP35575 357 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 RNPS1Q15287 305 aaKnown RBP12.04□□□□□ -0.48
SHPK-201ENST00000225519 USF3Q68DE3 2245 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 SIRPB1O00241 398 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 SPINK4O60575 86 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 IL6RP08887 468 aaPredicted RBP12.04□□□□□ -0.48
SHPK-201ENST00000225519 TEX43Q6ZNM6 134 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 C17orf82Q86X59 251 aaPredicted RBP12.04□□□□□ -0.48
SHPK-201ENST00000225519 STARD4Q96DR4 205 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 NPCDR1Q9BY65 106 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 AMTP48728 403 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 RAC1P63000 192 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 FOXL1Q12952 345 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 DAZAP2Q15038 168 aaPredicted RBP12.04□□□□□ -0.48
SHPK-201ENST00000225519 SRSF7Q16629 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
SHPK-201ENST00000225519 RNF151Q2KHN1 245 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 SPATA45Q537H7 98 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 ZNF114Q8NC26 417 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 OR1L6Q8NGR2 347 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 RNF138Q8WVD3 245 aa12.04□□□□□ -0.48
SHPK-201ENST00000225519 RNF212BA8MTL3 300 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 CD99P14209 185 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 LIFP15018 202 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 TMEM14EPQ6UXP3 125 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 OR4B1Q8NGF8 309 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 A8MXE2 369 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 SNURFLB1AK76 121 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 OR5G3P0C626 314 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 GLB1P16278 677 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 TMPRSS7Q7RTY8 843 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 ZNF585BQ52M93 769 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 GCSAMLQ5JQS6 135 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 KMT5CQ86Y97 462 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 FAM58AQ8N1B3 248 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 OR5A2Q8NGI9 324 aa12.03□□□□□ -0.48
SHPK-201ENST00000225519 ZNF552Q9H707 407 aaPredicted RBP12.03□□□□□ -0.48
SHPK-201ENST00000225519 IGHV1OR15-9A0A0B4J2B8 117 aa12.02□□□□□ -0.48
SHPK-201ENST00000225519 SLC17A3O00476 420 aa12.02□□□□□ -0.48
SHPK-201ENST00000225519 ZIC3O60481 467 aa12.02□□□□□ -0.48
SHPK-201ENST00000225519 ZG16O60844 167 aa12.02□□□□□ -0.48
SHPK-201ENST00000225519 RAC3P60763 192 aa12.02□□□□□ -0.48
SHPK-201ENST00000225519 ETFRF1Q6IPR1 90 aa12.02□□□□□ -0.48
SHPK-201ENST00000225519 PARD6GQ9BYG4 376 aaPredicted RBP12.02□□□□□ -0.48
SHPK-201ENST00000225519 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.02□□□□□ -0.48
SHPK-201ENST00000225519 CEP250Q9BV73 2442 aa12.02□□□□□ -0.48
SHPK-201ENST00000225519 DOCK7Q96N67 2140 aa12.02□□□□□ -0.48
SHPK-201ENST00000225519 ACACAQ13085 2346 aa12.02□□□□□ -0.49
SHPK-201ENST00000225519 RBFOX2O43251 390 aaKnown RBP eCLIP12.02□□□□□ -0.49
SHPK-201ENST00000225519 RPP30P78346 268 aaKnown RBP12.02□□□□□ -0.49
SHPK-201ENST00000225519 TGFBR3Q03167 851 aa12.02□□□□□ -0.49
SHPK-201ENST00000225519 CEACAM21Q3KPI0 293 aa12.02□□□□□ -0.49
SHPK-201ENST00000225519 TMEM144Q7Z5S9 345 aa12.02□□□□□ -0.49
SHPK-201ENST00000225519 DLL3Q9NYJ7 618 aa12.02□□□□□ -0.49
SHPK-201ENST00000225519 A0A1W2PR77 199 aa12.02□□□□□ -0.49
SHPK-201ENST00000225519 FAM90A26D6RGX4 464 aa12.02□□□□□ -0.49
SHPK-201ENST00000225519 PDLIM3Q53GG5 364 aaPredicted RBP12.02□□□□□ -0.49
SHPK-201ENST00000225519 ZDHHC16Q969W1 377 aa12.02□□□□□ -0.49
SHPK-201ENST00000225519 SF3B5Q9BWJ5 86 aaKnown RBP12.02□□□□□ -0.49
SHPK-201ENST00000225519 CRIM1Q9NZV1 1036 aa12.02□□□□□ -0.49
SHPK-201ENST00000225519 NBASA2RRP1 2371 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 COL5A1P20908 1838 aaPredicted RBP12.01□□□□□ -0.49
SHPK-201ENST00000225519 IGLV3-12A0A075B6K2 115 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 ANKRD30BLA7E2S9 258 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 MLNRO43193 412 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 RAC2P15153 192 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 NTF4P34130 210 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 RPL19P84098 196 aaKnown RBP12.01□□□□□ -0.49
SHPK-201ENST00000225519 DRAM1Q8N682 238 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 CPEB3Q8NE35 698 aaKnown RBP12.01□□□□□ -0.49
SHPK-201ENST00000225519 OR1L1Q8NH94 360 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 IGHV3-64DA0A0J9YX35 117 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 LEMD1Q68G75 181 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 OR5P3Q8WZ94 311 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 APOBEC3DQ96AK3 386 aaPredicted RBP12.01□□□□□ -0.49
SHPK-201ENST00000225519 KCNIP2Q9NS61 270 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 NAT8BQ9UHF3 227 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 NTF3P20783 257 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 SSR4P51571 173 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 PCED1AQ9H1Q7 454 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 AKIRIN1Q9H9L7 192 aaPredicted RBP12.01□□□□□ -0.49
SHPK-201ENST00000225519 UQCR10Q9UDW1 63 aa12.01□□□□□ -0.49
SHPK-201ENST00000225519 TRAV24A0A0B4J272 114 aa12□□□□□ -0.49
SHPK-201ENST00000225519 HLA-DRB5Q30154 266 aa12□□□□□ -0.49
SHPK-201ENST00000225519 H2BFWTQ7Z2G1 175 aa12□□□□□ -0.49
SHPK-201ENST00000225519 TIPARPQ7Z3E1 657 aaKnown RBP12□□□□□ -0.49
SHPK-201ENST00000225519 C22orf15Q8WYQ4 148 aa12□□□□□ -0.49
SHPK-201ENST00000225519 STRADBQ9C0K7 418 aa12□□□□□ -0.49
SHPK-201ENST00000225519 EXPH5Q8NEV8 1989 aa12□□□□□ -0.49
SHPK-201ENST00000225519 F2Z2F3 143 aa12□□□□□ -0.49
SHPK-201ENST00000225519 KIAA1644Q3SXP7 199 aa12□□□□□ -0.49
SHPK-201ENST00000225519 SLC23A3Q6PIS1 610 aa12□□□□□ -0.49
SHPK-201ENST00000225519 SAXO1Q8IYX7 474 aa12□□□□□ -0.49
SHPK-201ENST00000225519 APH1AQ96BI3 265 aa12□□□□□ -0.49
SHPK-201ENST00000225519 RNF2Q99496 336 aa12□□□□□ -0.49
SHPK-201ENST00000225519 QTRT1Q9BXR0 403 aaKnown RBP12□□□□□ -0.49
SHPK-201ENST00000225519 DLL1O00548 723 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms