RNA–Protein interactions for RNA: ENST00000216121.11

NIPSNAP1-201, Transcript of nipsnap homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-201ENST00000216121 ZG16O60844 167 aa18.39■□□□□ 0.53
NIPSNAP1-201ENST00000216121 ZNF737O75373 536 aa18.39■□□□□ 0.53
NIPSNAP1-201ENST00000216121 TMEM242Q9NWH2 141 aa18.39■□□□□ 0.53
NIPSNAP1-201ENST00000216121 ST8SIA5O15466 376 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 Q3ZCU0 254 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 ACSM6Q6P461 480 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 OR10P1Q8NGE3 313 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 LHX4Q969G2 390 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 DCTN5Q9BTE1 182 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 PARD6AQ9NPB6 346 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 SLC25A15Q9Y619 301 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 LOC400499M0QZD8 3231 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CEBPZOSA8MTT3 80 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 DEFB108AA8MXU0 73 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 ZDHHC16Q969W1 377 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 SDF2L1Q9HCN8 221 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 WASF3Q9UPY6 502 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 URGCP-MRPS24S4R325 110 aa18.38■□□□□ 0.53
NIPSNAP1-201ENST00000216121 LINC00205P59089 165 aa18.37■□□□□ 0.53
NIPSNAP1-201ENST00000216121 DEFB109BQ30KR1 87 aa18.37■□□□□ 0.53
NIPSNAP1-201ENST00000216121 BEND4Q6ZU67 534 aa18.37■□□□□ 0.53
NIPSNAP1-201ENST00000216121 OR2Z1Q8NG97 314 aa18.37■□□□□ 0.53
NIPSNAP1-201ENST00000216121 SRRM5B3KS81 715 aa18.37■□□□□ 0.53
NIPSNAP1-201ENST00000216121 MBP02144 154 aa18.37■□□□□ 0.53
NIPSNAP1-201ENST00000216121 KIAA0141Q14154 515 aaPredicted RBP18.37■□□□□ 0.53
NIPSNAP1-201ENST00000216121 VWC2Q2TAL6 325 aa18.37■□□□□ 0.53
NIPSNAP1-201ENST00000216121 SEM1Q6ZVN7 128 aa18.37■□□□□ 0.53
NIPSNAP1-201ENST00000216121 EDARADDQ8WWZ3 215 aa18.37■□□□□ 0.53
NIPSNAP1-201ENST00000216121 TGIF2-C20orf24A0A0A6YYL0 155 aa18.36■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CEACAM4O75871 244 aa18.36■□□□□ 0.53
NIPSNAP1-201ENST00000216121 EGR1P18146 543 aa18.36■□□□□ 0.53
NIPSNAP1-201ENST00000216121 GZMHP20718 246 aa18.36■□□□□ 0.53
NIPSNAP1-201ENST00000216121 EIF2S3P41091 472 aaKnown RBP18.36■□□□□ 0.53
NIPSNAP1-201ENST00000216121 EDDM3AQ14507 147 aa18.36■□□□□ 0.53
NIPSNAP1-201ENST00000216121 FAM180AQ6UWF9 173 aa18.36■□□□□ 0.53
NIPSNAP1-201ENST00000216121 SLC16A13Q7RTY0 426 aa18.36■□□□□ 0.53
NIPSNAP1-201ENST00000216121 FAM90A1Q86YD7 464 aa18.36■□□□□ 0.53
NIPSNAP1-201ENST00000216121 NANPQ8TBE9 248 aa18.36■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CACNA1HO95180 2353 aa18.36■□□□□ 0.53
NIPSNAP1-201ENST00000216121 IGKV1D-17A0A075B6S4 117 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 MBD3L4A6NDZ8 208 aaPredicted RBP18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 MBD3L3A6NE82 208 aaPredicted RBP18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 MBD3L5A6NJ08 208 aaPredicted RBP18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 MARCH11A6NNE9 402 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CYB5R3P00387 301 aaPredicted RBP18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 FGF7P21781 194 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CFHR2P36980 270 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 RND2P52198 227 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 MBD3L2Q8NHZ7 208 aaPredicted RBP18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CTXND1A0A1B0GTU2 59 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 GNB2P62879 340 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CTAG1AP78358 180 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 MSMPQ1L6U9 139 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 ZNF674Q2M3X9 581 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CR1LQ2VPA4 569 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 WDR25Q64LD2 544 aaPredicted RBP18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 NCR3LG1Q68D85 454 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 FAM216AQ8WUB2 273 aa18.35■□□□□ 0.53
NIPSNAP1-201ENST00000216121 GALR2O43603 387 aaPredicted RBP18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 PROP1O75360 226 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 RBMXL2O75526 392 aaKnown RBP18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 DUTP33316 252 aaKnown RBP18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CD81P60033 236 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 IGF2-ASQ6U949 168 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CLDN34H7C241 214 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CLN5O75503 358 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 HOXA5P20719 270 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 MDKP21741 143 aaPredicted RBP18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 GPR12P47775 334 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 HNF4GQ14541 408 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 OR10G9Q8NGN4 311 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 OR10G7Q8NGN6 311 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 R3HDM4Q96D70 268 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 SNX22Q96L94 193 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 ZNF251Q9BRH9 671 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 JPT1Q9UK76 154 aa18.34■□□□□ 0.53
NIPSNAP1-201ENST00000216121 MGST3O14880 152 aa18.33■□□□□ 0.53
NIPSNAP1-201ENST00000216121 MEF2BQ02080 365 aaPredicted RBP18.33■□□□□ 0.53
NIPSNAP1-201ENST00000216121 AARDQ4LEZ3 155 aa18.33■□□□□ 0.53
NIPSNAP1-201ENST00000216121 MORN2Q502X0 79 aa18.33■□□□□ 0.53
NIPSNAP1-201ENST00000216121 LRP11Q86VZ4 500 aa18.33■□□□□ 0.53
NIPSNAP1-201ENST00000216121 NPCDR1Q9BY65 106 aa18.33■□□□□ 0.53
NIPSNAP1-201ENST00000216121 DUSP13Q9UII6 198 aa18.33■□□□□ 0.53
NIPSNAP1-201ENST00000216121 CYB5BO43169 146 aa18.33■□□□□ 0.52
NIPSNAP1-201ENST00000216121 TFF3Q07654 80 aa18.33■□□□□ 0.52
NIPSNAP1-201ENST00000216121 LTC4SQ16873 150 aa18.33■□□□□ 0.52
NIPSNAP1-201ENST00000216121 FFAR4Q5NUL3 377 aa18.33■□□□□ 0.52
NIPSNAP1-201ENST00000216121 OR13D1Q8NGV5 346 aa18.33■□□□□ 0.52
NIPSNAP1-201ENST00000216121 PPP1R35Q8TAP8 253 aa18.33■□□□□ 0.52
NIPSNAP1-201ENST00000216121 SLC25A22Q9H936 323 aa18.33■□□□□ 0.52
NIPSNAP1-201ENST00000216121 OTOGLQ3ZCN5 2332 aa18.32■□□□□ 0.52
NIPSNAP1-201ENST00000216121 FAM90A9PA6NNJ1 464 aa18.32■□□□□ 0.52
NIPSNAP1-201ENST00000216121 YPEL1O60688 119 aa18.32■□□□□ 0.52
NIPSNAP1-201ENST00000216121 NCMAPQ5T1S8 102 aa18.32■□□□□ 0.52
NIPSNAP1-201ENST00000216121 GCSAMQ8N6F7 178 aa18.32■□□□□ 0.52
NIPSNAP1-201ENST00000216121 YPEL2Q96QA6 119 aa18.32■□□□□ 0.52
NIPSNAP1-201ENST00000216121 QTRT1Q9BXR0 403 aaKnown RBP18.32■□□□□ 0.52
NIPSNAP1-201ENST00000216121 TMPRSS5Q9H3S3 457 aa18.32■□□□□ 0.52
NIPSNAP1-201ENST00000216121 GNG12Q9UBI6 72 aa18.32■□□□□ 0.52
NIPSNAP1-201ENST00000216121 HPRT1P00492 218 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms