RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 BCL2P10415 239 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 SLC25A6P12236 298 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 BMP5P22003 454 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 NDUFA6P56556 154 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 TNFRSF9Q07011 255 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 SLC38A11Q08AI6 406 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 ACSM6Q6P461 480 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 SPNS3Q6ZMD2 512 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 OR13A1Q8NGR1 328 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 WDR61Q9GZS3 305 aaKnown RBP14.09□□□□□ -0.15
PHGDH-223ENST00000641597 SEBOXQ9HB31 216 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-223ENST00000641597 CLCF1Q9UBD9 225 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 IQCF6A8MYZ5 107 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 RAC2P15153 192 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 EDDM3AQ14507 147 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 C4orf17Q53FE4 359 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 SPRNQ5BIV9 151 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 FAM214BQ7L5A3 538 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 WDR31Q8NA23 367 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 GALMQ96C23 342 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 SLC25A22Q9H936 323 aa14.09□□□□□ -0.15
PHGDH-223ENST00000641597 TRGC2P03986 189 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 KIR2DL2P43627 348 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-223ENST00000641597 CTAG1AP78358 180 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 MRPL49Q13405 166 aaKnown RBP14.08□□□□□ -0.16
PHGDH-223ENST00000641597 KHDC3LQ587J8 217 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 WDR82Q6UXN9 313 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 MOB1BQ7L9L4 216 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 CA5BP1Q8WTZ4 195 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 TCTEX1D2Q8WW35 142 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 FAM234AQ9H0X4 552 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 GSN-AS1Q9NRJ2 163 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 RYDENQ9NUL5 291 aaKnown RBP14.08□□□□□ -0.16
PHGDH-223ENST00000641597 TREM2Q9NZC2 230 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 PIEZO2Q9H5I5 2752 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 MAP1LC3B2A6NCE7 125 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 TGFBR3Q03167 851 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 TFF3Q07654 80 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 Q8IYB0 196 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 TMEM178AQ8NBL3 297 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 TAF15Q92804 592 aaKnown RBP eCLIP14.08□□□□□ -0.16
PHGDH-223ENST00000641597 MALSU1Q96EH3 234 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 MAP1LC3BQ9GZQ8 125 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 SMDT1Q9H4I9 107 aa14.08□□□□□ -0.16
PHGDH-223ENST00000641597 TMEM30CPA0ZSE6 113 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 CECR9P0C854 216 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 COL10A1Q03692 680 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 KCNIP1Q9NZI2 227 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 HCFC1P51610 2035 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 TRBV23-1A0A0A0MS06 115 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 SPAARA0A1B0GVQ0 90 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 TIMM8AO60220 97 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-223ENST00000641597 RBMXL2O75526 392 aaKnown RBP14.07□□□□□ -0.16
PHGDH-223ENST00000641597 HBE1P02100 147 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 B2MP61769 119 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 MSMPQ1L6U9 139 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 CLEC12BQ2HXU8 276 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 Q6ZT83 130 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 ZNF645Q8N7E2 425 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 UNKLQ9H9P5 680 aaKnown RBP14.07□□□□□ -0.16
PHGDH-223ENST00000641597 HES4Q9HCC6 221 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 DOK5Q9P104 306 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 PSG11Q9UQ72 335 aa14.07□□□□□ -0.16
PHGDH-223ENST00000641597 HBG1P69891 147 aa14.06□□□□□ -0.16
PHGDH-223ENST00000641597 HBG2P69892 147 aa14.06□□□□□ -0.16
PHGDH-223ENST00000641597 TRIP6Q15654 476 aaKnown RBP14.06□□□□□ -0.16
PHGDH-223ENST00000641597 Q3ZCU0 254 aa14.06□□□□□ -0.16
PHGDH-223ENST00000641597 ACP7Q6ZNF0 438 aa14.06□□□□□ -0.16
PHGDH-223ENST00000641597 VKORC1L1Q8N0U8 176 aa14.06□□□□□ -0.16
PHGDH-223ENST00000641597 OPN3Q9H1Y3 402 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-223ENST00000641597 IFNA17P01571 189 aa14.06□□□□□ -0.16
PHGDH-223ENST00000641597 S100A9P06702 114 aaKnown RBP14.06□□□□□ -0.16
PHGDH-223ENST00000641597 FABP1P07148 127 aa14.06□□□□□ -0.16
PHGDH-223ENST00000641597 MAS1LP35410 378 aa14.06□□□□□ -0.16
PHGDH-223ENST00000641597 SSX9Q7RTT3 188 aa14.06□□□□□ -0.16
PHGDH-223ENST00000641597 LRP11Q86VZ4 500 aa14.06□□□□□ -0.16
PHGDH-223ENST00000641597 MIOXQ9UGB7 285 aa14.06□□□□□ -0.16
PHGDH-223ENST00000641597 IGHV3OR15-7A0A075B7D8 119 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 TRAV1-1A0A0B4J248 108 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 HIST1H2BKO60814 126 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 HIST1H2BJP06899 126 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 SMIM6P0DI80 62 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 EGR1P18146 543 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 HIST1H2BOP23527 126 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 HIST1H2BBP33778 126 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 HIST1H2BDP58876 126 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 HIST1H2BCP62807 126 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 EIF4EBP1Q13541 118 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-223ENST00000641597 HIST2H2BEQ16778 126 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-223ENST00000641597 TMEM14EPQ6UXP3 125 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 CD177Q8N6Q3 437 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 HIST1H2BHQ93079 126 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 LHX4Q969G2 390 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 HIST1H2BNQ99877 126 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 HIST1H2BMQ99879 126 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 PTPRBP23467 1997 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 LRRC30A6NM36 301 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 PROP1O75360 226 aa14.05□□□□□ -0.16
PHGDH-223ENST00000641597 NECAP1Q8NC96 275 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms