RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 NUP37Q8NFH4 326 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 OR13A1Q8NGR1 328 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 KPTNQ9Y664 436 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 FAM90A27PA6NNH2 459 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 DFFBO76075 338 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 H2AFB1P0C5Y9 115 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 SSTR5P35346 364 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 CFHR2P36980 270 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 PPT1P50897 306 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 MSMO1Q15800 293 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 MOGAT3Q86VF5 341 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 CBLN2Q8IUK8 224 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 KDF1Q8NAX2 398 aaPredicted RBP12.58□□□□□ -0.4
TRIM3-215ENST00000639856 OR10Z1Q8NGY1 313 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 ITLN1Q8WWA0 313 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 C5orf30Q96GV9 206 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 MEGF10Q96KG7 1140 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 EIF5A2Q9GZV4 153 aaKnown RBP12.58□□□□□ -0.4
TRIM3-215ENST00000639856 ESRP2Q9H6T0 727 aaKnown RBP12.58□□□□□ -0.4
TRIM3-215ENST00000639856 MMP24Q9Y5R2 645 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 ZNF737O75373 536 aa12.57□□□□□ -0.4
TRIM3-215ENST00000639856 PPP1CCP36873 323 aaKnown RBP12.57□□□□□ -0.4
TRIM3-215ENST00000639856 TMEM267Q0VDI3 215 aaPredicted RBP12.57□□□□□ -0.4
TRIM3-215ENST00000639856 TRAT1Q6PIZ9 186 aa12.57□□□□□ -0.4
TRIM3-215ENST00000639856 FAM90A1Q86YD7 464 aa12.57□□□□□ -0.4
TRIM3-215ENST00000639856 COA4Q9NYJ1 87 aa12.57□□□□□ -0.4
TRIM3-215ENST00000639856 FAM90A26D6RGX4 464 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 RAMP3O60896 148 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 GRNP28799 593 aaKnown RBP12.56□□□□□ -0.4
TRIM3-215ENST00000639856 TAS2R30P59541 319 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 RPL30P62888 115 aaKnown RBP12.56□□□□□ -0.4
TRIM3-215ENST00000639856 RUNX1Q01196 453 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 CATR1Q13166 79 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 CDSNQ15517 529 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 ZNF808Q8N4W9 903 aaPredicted RBP12.56□□□□□ -0.4
TRIM3-215ENST00000639856 PBDC1Q9BVG4 233 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 SEBOXQ9HB31 216 aaPredicted RBP12.56□□□□□ -0.4
TRIM3-215ENST00000639856 PSENENQ9NZ42 101 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 USF3Q68DE3 2245 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 ANKHD1Q8IWZ3 2542 aaKnown RBP12.56□□□□□ -0.4
TRIM3-215ENST00000639856 IGKV1D-17A0A075B6S4 117 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 C15orf65H3BRN8 121 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 IGHV1-46P01743 117 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 IAPPP10997 89 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 ADIPOQQ15848 244 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 GCSAMQ8N6F7 178 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 ABHD14AQ9BUJ0 271 aa12.56□□□□□ -0.4
TRIM3-215ENST00000639856 IGHV3OR15-7A0A075B7D8 119 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 A0A1B0GW64 132 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 SPINT2O43291 252 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 SELENOVP59797 346 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 HTD2P86397 168 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 ADORA2A-AS1P86434 159 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 TCTEX1D1Q8N7M0 179 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 ACACBO00763 2458 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 IFNA5P01569 189 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 ADH4P08319 380 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 OR4A8P0C604 315 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 P0C879 139 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 NFYBP25208 207 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 EDDM3AQ14507 147 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 RFESDQ8TAC1 157 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 DCTN5Q9BTE1 182 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 KCNJ16Q9NPI9 418 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 NDRG3Q9UGV2 375 aa12.55□□□□□ -0.4
TRIM3-215ENST00000639856 IGHV3-43A0A0B4J1X8 118 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 A0A1B0GV50 99 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 BTBD17A6NE02 478 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 GPR37O15354 613 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 KRASP01116 189 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 METTL15P1P0C7V9 234 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 IGHV3-43DP0DP04 118 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 GZMHP20718 246 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 BRWD1-AS2P59051 145 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 TNFAIP6P98066 277 aaPredicted RBP12.54□□□□□ -0.4
TRIM3-215ENST00000639856 ZNF816Q0VGE8 651 aaPredicted RBP12.54□□□□□ -0.4
TRIM3-215ENST00000639856 OR2B11Q5JQS5 317 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 FAM201AQ5SY85 155 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 AKR1C8PQ5T2L2 129 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 SPSB3Q6PJ21 355 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 PPP1R35Q8TAP8 253 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 TCTEX1D2Q8WW35 142 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 SNX22Q96L94 193 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 FBXO7Q9Y3I1 522 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 HIVEP3Q5T1R4 2406 aa12.54□□□□□ -0.4
TRIM3-215ENST00000639856 DSCAMO60469 2012 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 MEX3AA1L020 520 aaKnown RBP12.53□□□□□ -0.4
TRIM3-215ENST00000639856 C17orf98A8MV24 154 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 MGST3O14880 152 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 CLDN1O95832 211 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 CTRB1P17538 263 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 CHRNB4P30926 498 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 G6PCP35575 357 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 UBE2KP61086 200 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 HBG1P69891 147 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 HBG2P69892 147 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 TNFRSF9Q07011 255 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 HFEQ30201 348 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 CTRB2Q6GPI1 263 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 SLC25A24Q6NUK1 477 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms