RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 KIAA2026Q5HYC2 2103 aa13.2□□□□□ -0.3
CACNA1A-235ENST00000637004 CACNA1EQ15878 2313 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 CHD3Q12873 2000 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 DEGS1O15121 323 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 TMPRSS2O15393 492 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 PDE6DO43924 150 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 BRS3P32247 399 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 ARSJQ5FYB0 599 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 FFAR4Q5NUL3 377 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 AAED1Q7RTV5 226 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 OR51B6Q9H340 312 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 LPAR2Q9HBW0 351 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 CNOT1A5YKK6 2376 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 PRR33A8MZF0 331 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 GPM6AP51674 278 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 ZNF709Q8N972 641 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 OR56B2PQ8NGI1 322 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 SRXN1Q9BYN0 137 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 MTCH1Q9NZJ7 389 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 IL36RNQ9UBH0 155 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 CHTOPQ9Y3Y2 248 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 ZNF292O60281 2723 aa13.19□□□□□ -0.3
CACNA1A-235ENST00000637004 OTOGLQ3ZCN5 2332 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 NUPR1O60356 82 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 RAC3P60763 192 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 MRPS11P82912 194 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 CEACAM21Q3KPI0 293 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 ZNF468Q5VIY5 522 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 ASXL3Q9C0F0 2248 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 NPIPB11E5RHQ5 1161 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 YPEL1O60688 119 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 SCRG1O75711 98 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 ZNF16P17020 682 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 CEACAM16Q2WEN9 425 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 C20orf204Q6ZNR8 217 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 ZDHHC23Q8IYP9 409 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 IL1F10Q8WWZ1 152 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 YPEL2Q96QA6 119 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 FSCN3Q9NQT6 498 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 RYDENQ9NUL5 291 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 PPP1R3CQ9UQK1 317 aa13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 RBM7Q9Y580 266 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-235ENST00000637004 C1QTNF9BB2RNN3 333 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 NXPH1P58417 271 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 YPEL3P61236 119 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 ZNF585BQ52M93 769 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 RIPPLY2Q5TAB7 128 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 OR2J1Q9GZK6 312 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 ELOVL5Q9NYP7 299 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 PLA2G3Q9NZ20 509 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 A0A1B0GUS0 222 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 HS3ST1O14792 307 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 TIAF1O95411 115 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 TNFSF10P50591 281 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 TPTE2P1Q5T6R2 138 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 CPEB3Q8NE35 698 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 SGMS2Q8NHU3 365 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 FGFBP3Q8TAT2 258 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 VAMP8Q9BV40 100 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 CEP250Q9BV73 2442 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 SERPINA7P05543 415 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 SP9P0CG40 484 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 NPPCP23582 126 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 MPLP40238 635 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 SELENOTP62341 195 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 PMP22Q01453 160 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 COL5A1-AS1Q5SY13 56 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 NUFIP2Q7Z417 695 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 OR6C1Q96RD1 312 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 DIRC2Q96SL1 478 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 ZDHHC11Q9H8X9 412 aa13.17□□□□□ -0.3
CACNA1A-235ENST00000637004 IGLV2-14P01704 120 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 UMODP07911 640 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 NTF4P34130 210 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 COLCA1Q6ZS62 124 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 Q6ZWC4 215 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 OR10P1Q8NGE3 313 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 RDH5Q92781 318 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 PCED1AQ9H1Q7 454 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 KCNS2Q9ULS6 477 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 PIEZO1Q92508 2521 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 MYF5P13349 255 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 ADMP35318 185 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 OR5I1Q13606 314 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 MSMO1Q15800 293 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 FGFRL1Q8N441 504 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 SFRP2Q96HF1 295 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 FGF23Q9GZV9 251 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 PATZ1Q9HBE1 687 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 OR1A1Q9P1Q5 309 aa13.16□□□□□ -0.3
CACNA1A-235ENST00000637004 CNTRLQ7Z7A1 2325 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 MDFIC2A0A1B0GVS7 189 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 LNP1A1A4G5 178 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 RNF212BA8MTL3 300 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 C17orf112F2Z3M2 114 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 F6UZH7 168 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 KRASP01116 189 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 IL6RP08887 468 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 CCL3P10147 92 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms