RNA–Protein interactions for RNA: ENST00000635973.1

CLN3-243, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-243ENST00000635973 DIRAS2Q96HU8 199 aa14.49□□□□□ -0.09
CLN3-243ENST00000635973 SLC25A33Q9BSK2 321 aa14.49□□□□□ -0.09
CLN3-243ENST00000635973 MRPL20Q9BYC9 149 aaKnown RBP14.49□□□□□ -0.09
CLN3-243ENST00000635973 TOLLIPQ9H0E2 274 aa14.49□□□□□ -0.09
CLN3-243ENST00000635973 OR2D2Q9H210 308 aa14.49□□□□□ -0.09
CLN3-243ENST00000635973 NECAP2Q9NVZ3 263 aa14.49□□□□□ -0.09
CLN3-243ENST00000635973 TGP01266 2768 aa14.49□□□□□ -0.09
CLN3-243ENST00000635973 TSPAN15O95858 294 aa14.48□□□□□ -0.09
CLN3-243ENST00000635973 NFYAP23511 347 aaPredicted RBP14.48□□□□□ -0.09
CLN3-243ENST00000635973 HNF4GQ14541 408 aa14.48□□□□□ -0.09
CLN3-243ENST00000635973 C16orf82Q7Z2V1 217 aa14.48□□□□□ -0.09
CLN3-243ENST00000635973 THNSL2Q86YJ6 484 aa14.48□□□□□ -0.09
CLN3-243ENST00000635973 SNAPC3Q92966 411 aa14.48□□□□□ -0.09
CLN3-243ENST00000635973 AGMATQ9BSE5 352 aa14.48□□□□□ -0.09
CLN3-243ENST00000635973 RANBP3Q9H6Z4 567 aaPredicted RBP14.48□□□□□ -0.09
CLN3-243ENST00000635973 WNK1Q9H4A3 2382 aa14.48□□□□□ -0.09
CLN3-243ENST00000635973 DPPA5A6NC42 116 aa14.47□□□□□ -0.09
CLN3-243ENST00000635973 FAM90A9PA6NNJ1 464 aa14.47□□□□□ -0.09
CLN3-243ENST00000635973 J3QRK9 145 aa14.47□□□□□ -0.09
CLN3-243ENST00000635973 OR2F2O95006 317 aa14.47□□□□□ -0.09
CLN3-243ENST00000635973 CD1BP29016 333 aa14.47□□□□□ -0.09
CLN3-243ENST00000635973 TAS2R46P59540 309 aa14.47□□□□□ -0.09
CLN3-243ENST00000635973 LSAMPQ13449 338 aa14.47□□□□□ -0.09
CLN3-243ENST00000635973 HABP2Q14520 560 aaPredicted RBP14.47□□□□□ -0.09
CLN3-243ENST00000635973 ARSJQ5FYB0 599 aaPredicted RBP14.47□□□□□ -0.09
CLN3-243ENST00000635973 OR2T10Q8NGZ9 312 aa14.47□□□□□ -0.09
CLN3-243ENST00000635973 GPX8Q8TED1 209 aa14.47□□□□□ -0.09
CLN3-243ENST00000635973 RBM14Q96PK6 669 aaKnown RBP14.47□□□□□ -0.09
CLN3-243ENST00000635973 SIGLEC9Q9Y336 463 aa14.47□□□□□ -0.09
CLN3-243ENST00000635973 SULT1C2O00338 296 aa14.46□□□□□ -0.09
CLN3-243ENST00000635973 RCVRNP35243 200 aa14.46□□□□□ -0.09
CLN3-243ENST00000635973 LUMP51884 338 aaPredicted RBP14.46□□□□□ -0.09
CLN3-243ENST00000635973 IL18Q14116 193 aa14.46□□□□□ -0.09
CLN3-243ENST00000635973 FBLN7Q53RD9 439 aa14.46□□□□□ -0.09
CLN3-243ENST00000635973 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.46□□□□□ -0.09
CLN3-243ENST00000635973 OR5AP2Q8NGF4 316 aa14.46□□□□□ -0.09
CLN3-243ENST00000635973 OR5H2Q8NGV7 314 aa14.46□□□□□ -0.09
CLN3-243ENST00000635973 DGCR14Q96DF8 476 aaKnown RBP14.46□□□□□ -0.09
CLN3-243ENST00000635973 NABP2Q9BQ15 211 aa14.46□□□□□ -0.09
CLN3-243ENST00000635973 NXF2Q9GZY0 626 aaKnown RBP14.46□□□□□ -0.09
CLN3-243ENST00000635973 EHFQ9NZC4 300 aa14.46□□□□□ -0.09
CLN3-243ENST00000635973 MOB4Q9Y3A3 225 aa14.46□□□□□ -0.09
CLN3-243ENST00000635973 ZNF736B4DX44 427 aaPredicted RBP14.45□□□□□ -0.1
CLN3-243ENST00000635973 M0R1X1 148 aa14.45□□□□□ -0.1
CLN3-243ENST00000635973 TPPPO94811 219 aa14.45□□□□□ -0.1
CLN3-243ENST00000635973 OR5H8P0DN80 308 aa14.45□□□□□ -0.1
CLN3-243ENST00000635973 VSIG10L2P0DP72 767 aa14.45□□□□□ -0.1
CLN3-243ENST00000635973 FCGR2CP31995 323 aa14.45□□□□□ -0.1
CLN3-243ENST00000635973 S100A5P33763 92 aa14.45□□□□□ -0.1
CLN3-243ENST00000635973 CDK10Q15131 360 aa14.45□□□□□ -0.1
CLN3-243ENST00000635973 EAF1Q96JC9 268 aaPredicted RBP14.45□□□□□ -0.1
CLN3-243ENST00000635973 ANAPC10Q9UM13 185 aa14.45□□□□□ -0.1
CLN3-243ENST00000635973 OR2W1Q9Y3N9 320 aa14.45□□□□□ -0.1
CLN3-243ENST00000635973 NCBP2LA6PVI3 153 aaKnown RBP14.44□□□□□ -0.1
CLN3-243ENST00000635973 M0QZK8 103 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 PEX14O75381 377 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 MOSP00540 346 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 PMP2P02689 132 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 HLA-DMAP28067 261 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 ACTBP60709 375 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 PYHIN1Q6K0P9 492 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 GLDNQ6ZMI3 551 aaPredicted RBP14.44□□□□□ -0.1
CLN3-243ENST00000635973 KLHDC1Q8N7A1 406 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 C11orf44Q8N8P7 122 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 DRAXINQ8NBI3 349 aaPredicted RBP14.44□□□□□ -0.1
CLN3-243ENST00000635973 FCAMRQ8WWV6 532 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 ABHD1Q96SE0 405 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 ZNF251Q9BRH9 671 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 PRSS22Q9GZN4 317 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 SDHAF2Q9NX18 166 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 RABL2AQ9UBK7 228 aaPredicted RBP14.44□□□□□ -0.1
CLN3-243ENST00000635973 RABL2BQ9UNT1 228 aa14.44□□□□□ -0.1
CLN3-243ENST00000635973 VWFP04275 2813 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 CMYA5Q8N3K9 4069 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 OR5H14A6NHG9 310 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 H7C2Y5 167 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 CT45A6P0DMU7 189 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 CT45A5P0DMU8 189 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 CT45A7P0DMV0 189 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 NAT1P18440 290 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 AADACP22760 399 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 TNFSF8P32971 234 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 HRH1P35367 487 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 HERV-K104P61576 105 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 FAM131AQ6UXB0 335 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 ZNF645Q8N7E2 425 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 OR52I2Q8NH67 350 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 A3GALT2U3KPV4 340 aa14.43□□□□□ -0.1
CLN3-243ENST00000635973 FABP12A6NFH5 140 aa14.42□□□□□ -0.1
CLN3-243ENST00000635973 RBBP9O75884 186 aa14.42□□□□□ -0.1
CLN3-243ENST00000635973 APOA2P02652 100 aa14.42□□□□□ -0.1
CLN3-243ENST00000635973 RFX2P48378 723 aa14.42□□□□□ -0.1
CLN3-243ENST00000635973 FXYD4P59646 89 aa14.42□□□□□ -0.1
CLN3-243ENST00000635973 MRPS10P82664 201 aaKnown RBP14.42□□□□□ -0.1
CLN3-243ENST00000635973 EBI3Q14213 229 aa14.42□□□□□ -0.1
CLN3-243ENST00000635973 ABCA11PQ4W5N1 156 aa14.42□□□□□ -0.1
CLN3-243ENST00000635973 C9orf152Q5JTZ5 239 aa14.42□□□□□ -0.1
CLN3-243ENST00000635973 FOXB2Q5VYV0 432 aa14.42□□□□□ -0.1
CLN3-243ENST00000635973 C1QL4Q86Z23 238 aa14.42□□□□□ -0.1
CLN3-243ENST00000635973 GAB2Q9UQC2 676 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms