RNA–Protein interactions for RNA: ENST00000635895.1

CACNA1A-218, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-218ENST00000635895 NPIPB8E9PQR5 432 aa16.97■□□□□ 0.31
CACNA1A-218ENST00000635895 NPIPB9F8W1W9 429 aa16.97■□□□□ 0.31
CACNA1A-218ENST00000635895 NPIPB7O75200 414 aa16.97■□□□□ 0.31
CACNA1A-218ENST00000635895 MVDP53602 400 aa16.97■□□□□ 0.31
CACNA1A-218ENST00000635895 FSCN3Q9NQT6 498 aa16.97■□□□□ 0.31
CACNA1A-218ENST00000635895 TRAV21A0A0B4J279 112 aa16.97■□□□□ 0.31
CACNA1A-218ENST00000635895 SIGLEC5O15389 551 aa16.97■□□□□ 0.31
CACNA1A-218ENST00000635895 HOXA5P20719 270 aa16.97■□□□□ 0.31
CACNA1A-218ENST00000635895 ZNF562Q6V9R5 426 aa16.97■□□□□ 0.31
CACNA1A-218ENST00000635895 TAF1LQ8IZX4 1826 aa16.96■□□□□ 0.31
CACNA1A-218ENST00000635895 HPRT1P00492 218 aa16.96■□□□□ 0.31
CACNA1A-218ENST00000635895 LGALS1P09382 135 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-218ENST00000635895 MS4A5Q9H3V2 200 aa16.96■□□□□ 0.31
CACNA1A-218ENST00000635895 TRGC2P03986 189 aa16.96■□□□□ 0.31
CACNA1A-218ENST00000635895 SPNP16150 400 aa16.96■□□□□ 0.31
CACNA1A-218ENST00000635895 DNAJC25-GNG10A0A024R161 153 aa16.96■□□□□ 0.31
CACNA1A-218ENST00000635895 PLSCR2Q9NRY7 297 aa16.96■□□□□ 0.31
CACNA1A-218ENST00000635895 IGHV3-20A0A0C4DH32 117 aa16.96■□□□□ 0.31
CACNA1A-218ENST00000635895 HOXD3P31249 432 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-218ENST00000635895 KIRREL2Q6UWL6 708 aa16.96■□□□□ 0.31
CACNA1A-218ENST00000635895 GDF9O60383 454 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 TMEM50BP56557 158 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 CX3CL1P78423 397 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 FAM209AQ5JX71 171 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 OTPQ5XKR4 325 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 RNF182Q8N6D2 247 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 SSPNQ14714 243 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 Q6AWC8 147 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 SLC23A3Q6PIS1 610 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 C12orf73Q69YU5 71 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 TTC9CQ8N5M4 171 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 MBNL2Q5VZF2 373 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 ZNF774Q6NX45 483 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 FAM159AQ6UWV7 190 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 PXMP4Q9Y6I8 212 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 A0A0A6YYD5 115 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 CXorf51AA0A1B0GTR3 108 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 MALP21145 153 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 CA7P43166 264 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 FAM106AQ4KMX7 169 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 C9orf62Q8N4C0 152 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 WSB2Q9NYS7 404 aaPredicted RBP16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 TCRBV5S2A0A599 114 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 MPLP40238 635 aa16.95■□□□□ 0.3
CACNA1A-218ENST00000635895 H0Y980 276 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 SFTPCP11686 197 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 MMDQ15546 238 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 DMRTA1Q5VZB9 504 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 GAPTQ8N292 157 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 OR5AN1Q8NGI8 311 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 PRDM14Q9GZV8 571 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 TMSB15BA0A087X1C1 80 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 DAOP14920 347 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 ZNF32P17041 273 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 NUBP1P53384 320 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 NXPH1P58417 271 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 TMEM160Q9NX00 188 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 CSPG4Q6UVK1 2322 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 FOXF1Q12946 379 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 TMEM30BQ3MIR4 351 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 LINC01559Q495D7 138 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 TMEM86BQ8N661 226 aa16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 MRPL32Q9BYC8 188 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-218ENST00000635895 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 ASAH2BP0C7U1 165 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 TNFRSF18Q9Y5U5 241 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 PLXNA2O75051 1894 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 TCRBV16S1A1N1A0A5B0 115 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 FAM90A26D6RGX4 464 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 GPX1P07203 203 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 PGLYRP3Q96LB9 341 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 NXT2Q9NPJ8 142 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 SPANXCQ9NY87 97 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 SLC25A37Q9NYZ2 338 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 HMX2A2RU54 273 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 C9orf172C9J069 976 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 SLURP2P0DP57 97 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 RNF186Q9NXI6 227 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 KCNE3Q9Y6H6 103 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 COX11Q9Y6N1 276 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 SPSB4Q96A44 273 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 TSPAN2O60636 221 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 RNFT1Q5M7Z0 435 aa16.93■□□□□ 0.3
CACNA1A-218ENST00000635895 TMIGD3P0DMS9 266 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 SCN7AQ01118 1682 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 CFAP161Q6P656 301 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 SHISA5Q8N114 240 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 PLPPR2Q96GM1 343 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 PGLYRP4Q96LB8 373 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 PDLIM7Q9NR12 457 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 BCORQ6W2J9 1755 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 ACSF3Q4G176 576 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 PRSS27Q9BQR3 290 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 LINC01549A6NIU2 74 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 PRKNO60260 465 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 STARD6P59095 220 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 ASB16Q96NS5 453 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 SLC25A15Q9Y619 301 aa16.92■□□□□ 0.3
CACNA1A-218ENST00000635895 FCARP24071 287 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms