RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 PLPPR1Q8TBJ4 325 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 STARD4Q96DR4 205 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 BARX1Q9HBU1 254 aaPredicted RBP3.84□□□□□ -1.79
SCN1A-210ENST00000635776 NPVFQ9HCQ7 196 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 IDI2-AS1Q9NZ38 188 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 BRWD1Q9NSI6 2320 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 IGSF23A1L1A6 192 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 C5orf63A6NC05 138 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 CORTO00230 105 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 FCGR3BO75015 233 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 OR2C1O95371 312 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 METTL15P1P0C7V9 234 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 CEACAM8P31997 349 aaPredicted RBP3.84□□□□□ -1.79
SCN1A-210ENST00000635776 PRRX1P54821 245 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 B2MP61769 119 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 HFEQ30201 348 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 CXorf66Q5JRM2 361 aaPredicted RBP3.84□□□□□ -1.79
SCN1A-210ENST00000635776 VWA1Q6PCB0 445 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF808Q8N4W9 903 aaPredicted RBP3.84□□□□□ -1.79
SCN1A-210ENST00000635776 SDSLQ96GA7 329 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 OR2V2Q96R30 315 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 SSUH2Q9Y2M2 353 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 K7N7A8 449 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 FGF7P21781 194 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 CEACAM3P40198 252 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 AESQ08117 197 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 SLC35D1Q9NTN3 355 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 PRR13Q9NZ81 148 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 CACNA1EQ15878 2313 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 A0A1W2PR80 420 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 PRSS12P56730 875 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 HSPE1P61604 102 aaKnown RBP3.84□□□□□ -1.79
SCN1A-210ENST00000635776 NCR3LG1Q68D85 454 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 VHLLQ6RSH7 139 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 HINT2Q9BX68 163 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 WDR61Q9GZS3 305 aaKnown RBP3.84□□□□□ -1.79
SCN1A-210ENST00000635776 SAP30LQ9HAJ7 183 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 COL5A1P20908 1838 aaPredicted RBP3.84□□□□□ -1.79
SCN1A-210ENST00000635776 IGHV1-18A0A0C4DH31 117 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 B9A039 149 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 FNDC10F2Z333 226 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 VENTXO95231 258 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 PTBP3O95758 552 aaKnown RBP3.84□□□□□ -1.79
SCN1A-210ENST00000635776 RPS10P46783 165 aaKnown RBP3.84□□□□□ -1.79
SCN1A-210ENST00000635776 LGALS7P47929 136 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 GNB2P62879 340 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF816Q0VGE8 651 aaPredicted RBP3.84□□□□□ -1.79
SCN1A-210ENST00000635776 TMEM241Q24JQ0 296 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 Q8TCH9 128 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 SMIM7Q9BQ49 75 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 GNG13Q9P2W3 67 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 LINC00312Q9Y6C7 94 aa3.84□□□□□ -1.79
SCN1A-210ENST00000635776 MARCH11A6NNE9 402 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 NUPL2O15504 423 aaKnown RBP3.84□□□□□ -1.8
SCN1A-210ENST00000635776 ZG16O60844 167 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 AGFG2O95081 481 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 CD40P25942 277 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 SELENOTP62341 195 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 C10orf91Q5T1B1 145 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 ATP1A1-AS1Q5TC04 95 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 BATF2Q8N1L9 274 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 LYPD6BQ8NI32 183 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 ELOA3CA0A087WX78 387 aaPredicted RBP3.84□□□□□ -1.8
SCN1A-210ENST00000635776 OR13C7P0DN81 318 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 AWAT1Q58HT5 328 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 VKORC1Q9BQB6 163 aa3.84□□□□□ -1.8
SCN1A-210ENST00000635776 IGLV3-9A0A075B6K5 115 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 KBTBD11-OT1A0A1B0GTJ5 212 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CLN5O75503 358 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CD1BP29016 333 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 TEPPQ6URK8 271 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 LCN15Q6UWW0 184 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 RXFP4Q8TDU9 374 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM242Q9NWH2 141 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 CLN8Q9UBY8 286 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF257Q9Y2Q1 563 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 THADAQ6YHU6 1953 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 MDFIC2A0A1B0GVS7 189 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 ZFP92A6NM28 416 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 RHBDL1O75783 438 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 FOLR2P14207 255 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 FOXG1P55316 489 aaPredicted RBP3.83□□□□□ -1.8
SCN1A-210ENST00000635776 LINC00518Q8N0U6 118 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 OR1L1Q8NH94 360 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 RAB1CQ92928 201 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 DOCK10Q96BY6 2186 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 KIAA2026Q5HYC2 2103 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 PPP5D1E7EU14 171 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 RNF144BQ7Z419 303 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 OR1L4Q8NGR5 311 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF714Q96N38 554 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 PFDN5Q99471 154 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 RAB1BQ9H0U4 201 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM231Q9H6L2 316 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 GFOD1Q9NXC2 390 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 OR1A1Q9P1Q5 309 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 IGKV1D-13A0A0B4J2D9 117 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 TRGV8A0A0C4DH27 118 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 F2RL2O00254 374 aa3.83□□□□□ -1.8
SCN1A-210ENST00000635776 IGKV1-13P0DP09 117 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms