RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ZNF621Q6ZSS3 439 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 SSX9Q7RTT3 188 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 HDDC2Q7Z4H3 204 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 LHFPL3Q86UP9 236 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 NKAIN4Q8IVV8 208 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 CEND1Q8N111 149 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 Q8N2B8 174 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 CD177Q8N6Q3 437 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 LY6G5BQ8NDX9 201 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 BPIFCQ8NFQ6 507 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 OR10AD1Q8NGE0 317 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 OR6N1Q8NGY5 312 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 OR2G2Q8NGZ5 317 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 C11orf40Q8WZ69 217 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 CCL17Q92583 94 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 RAB1CQ92928 201 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TNFRSF14Q92956 283 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TLCD1Q96CP7 247 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 OR2V2Q96R30 315 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM246Q9BRR3 403 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 OR51B6Q9H340 312 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 OR51M1Q9H341 326 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TXNIPQ9H3M7 391 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 ARMC7Q9H6L4 198 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC25A22Q9H936 323 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM165Q9HC07 324 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TUBG2Q9NRH3 451 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 INIPQ9NRY2 104 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TNFRSF19Q9NS68 423 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 CALYQ9NYX4 217 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 ZNRD1Q9P1U0 126 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 KAAG1Q9UBP8 84 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 VPREB3Q9UKI3 123 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 VSIG4Q9Y279 399 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 POFUT2Q9Y2G5 429 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 LHFPL6Q9Y693 200 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 PCLOQ9Y6V0 5065 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 FAT2Q9NYQ8 4349 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 IGLV1-36A0A0B4J1U3 117 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 TRAV25A0A0B4J276 109 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 IGHV1-69DA0A0B4J2H0 117 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 A0A0J9YXY3 114 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 A0A1B0GW55 424 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 A0A1W2PRG6 482 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM120BA0PK00 339 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 ISPDA4D126 451 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 RBMY1BA6NDE4 496 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 RBMY1EA6NEQ0 496 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 CPSF4LA6NMK7 179 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 ZNF879B4DU55 563 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 C12orf77C9JDV5 145 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 KRTAP4-16G5E9R7 235 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 SIRPB1O00241 398 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 KPNA4O00629 521 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 NDUFAB1O14561 156 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 FFAR1O14842 300 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 UBDO15205 165 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 MRPS12O15235 138 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 ENSAO43768 121 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 CHST1O43916 411 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 ZNF682O95780 498 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 CYB5R3P00387 301 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 LHBP01229 141 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 IGHV1-69P01742 117 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 OPN1SWP03999 348 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 RBMY1DP0C7P1 496 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 DUX4L2P0CJ85 424 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 DUX4L3P0CJ86 424 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 DUX4L4P0CJ87 422 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 DUX4L5P0CJ88 424 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 DUX4L6P0CJ89 424 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 DUX4L7P0CJ90 424 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 RBMY1A1P0DJD3 496 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 MSR1P21757 451 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 OMGP23515 440 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 GABRR1P24046 479 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 APLNRP35414 380 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 GGT2P36268 569 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 VDAC2P45880 294 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 CX3CR1P49238 355 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 RGS6P49758 472 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 GDI2P50395 445 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 APOC4P55056 127 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 MTPNP58546 118 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 TAS2R19P59542 299 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 NCALDP61601 193 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 LSM6P62312 80 aaKnown RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 TNFAIP6P98066 277 aaPredicted RBP1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 PAX5Q02548 391 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 LIPEQ05469 1076 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 ARFRP1Q13795 201 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 MPPED2Q15777 294 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 MOGQ16653 247 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 KLHL12Q53G59 568 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 COQ5Q5HYK3 327 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 LY6G6FQ5SQ64 297 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 FAM201AQ5SY85 155 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 GPR157Q5UAW9 335 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 TEX36Q5VZQ5 186 aa1.73□□□□□ -2.13
SMARCB1-208ENST00000634926 STUMQ69YW2 141 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms